Entamoeba histolytica: EHI_169260
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Entry
EHI_169260 CDS
T00238
Symbol
177.t00019
Name
(RefSeq) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
ehi
Entamoeba histolytica
Brite
KEGG Orthology (KO) [BR:
ehi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ehi03016
]
EHI_169260 (177.t00019)
Enzymes [BR:
ehi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
EHI_169260 (177.t00019)
Transfer RNA biogenesis [BR:
ehi03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
EHI_169260 (177.t00019)
Prokaryotic type
tRNA splicing ligases
EHI_169260 (177.t00019)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
UDPG_MGDP_dh_C
Motif
Other DBs
NCBI-GeneID:
3405505
NCBI-ProteinID:
XP_651200
UniProt:
C4M244
LinkDB
All DBs
AA seq
524 aa
AA seq
DB search
MSSGYKPGKKRIIQPIQPIKKELIDFHGCQIPKECEPYLERTNVSLIIKKGFINGMKNDA
EMFCNEDLFELLMNELLNEQPGASFSSCVRQTANVATLPGVIKSLAMPDAHSGYGFSIGG
VAAMRLDDPNAVICPGGVGFDINCGVRLLRTNLDDKDIEPHLAELADALQKNIPSGVGTT
STQTLTEKEMNEIMNEGLEWLVKKGLAWKEDLVYCEENGRIINSDPHLVSQKARGRGRNQ
LGTLGSGNHYLEIQRVDEIMDKEAAKQMGISHIGQICIMIHCGSRGLGHQVCQDFVDMCV
SQSNKNEVDIQLTGVPFQSDNGQKYFKAMNAAANYAFANRGMISYHVRCTFEQVFQKSPK
DLDMHLVYDVCHNIAKEESHLVDGKEIKCIVHRKGATRAFAPLNPVIPDAYKPIGQPAII
GGSMGTCSYMLVGTQEGMKKSFGSTCHGAGRKISRVNAMKNISSDSVVEEMKKKGIELRI
TDPKLAAEEADDAYKDVKEVVETCQSAGISRIVFKLKPLIVVKG
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctggatataaacctggcaagaaaagaataatacaacctattcaaccaattaag
aaagagttaattgatttccatggatgtcaaatacctaaagaatgtgagccttatttggaa
agaacaaatgtatctttgataattaaaaaaggatttattaatggaatgaaaaatgatgca
gagatgttttgtaacgaagacttatttgaattgttaatgaatgaattacttaatgaacaa
cctggtgcatcattttcatcttgtgtaagacaaactgcaaatgttgccacattacctgga
gttattaaatcattagctatgccagacgctcatagtggttatggattttcgattggagga
gttgctgctatgcgattagatgaccctaatgctgttatttgtccaggaggagttggattt
gatattaactgtggtgtaagattattacgaacaaatttagacgacaaagacattgaacct
catttagcagagcttgcagacgcacttcaaaagaatatccctagtggagttgggacaaca
tctacacaaacactcacagaaaaggaaatgaatgaaattatgaatgaaggtttggaatgg
ttagtaaaaaaaggtttagcatggaaagaagatttagtttattgtgaagaaaatggtaga
attatcaattctgacccccatctagttagtcagaaagcacgaggaagaggtagaaatcaa
cttgggacattaggaagtgggaaccattatctagaaatacagcgagtagatgaaattatg
gataaagaagcggctaaacaaatgggaatttcacacataggtcaaatatgtattatgatt
cattgtggtagtcgtggattaggtcatcaagtatgtcaagattttgttgatatgtgtgta
agtcaaagtaacaaaaatgaagttgatattcaattaacgggtgttccttttcaatctgac
aatggtcaaaaatattttaaagcaatgaatgcagcagcaaattatgcctttgcaaacagg
ggaatgatttcttatcatgtacgttgtacatttgaacaagtttttcaaaaatcaccaaaa
gatttagacatgcatttagtttatgatgtttgtcataatattgcaaaagaagaaagtcat
ttggttgatggtaaagaaataaaatgtattgtacatagaaaaggtgcaactcgtgctttt
gcccctttaaacccagttattcctgatgcctataaacctattggacaaccagcaatcatt
ggaggaagtatgggtacatgttcttatatgttggttggtacacaagaaggcatgaaaaaa
tcatttggatcgacttgtcatggagcaggacgtaagataagtagagtaaatgcaatgaaa
aatatttcttctgatagtgttgttgaagaaatgaagaaaaaaggcattgaactaagaata
actgatccaaaactagctgctgaggaagctgatgatgcttataaagatgtaaaagaggta
gtagagacatgtcagtcagctggaatatcaaggattgtatttaagttaaagccactaatt
gtagtaaaagggtaa
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