Entamoeba histolytica: EHI_169630
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Entry
EHI_169630 CDS
T00238
Symbol
223.t00007
Name
(RefSeq) DEAD/DEAH box helicase
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
ehi
Entamoeba histolytica
Brite
KEGG Orthology (KO) [BR:
ehi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ehi03041
]
EHI_169630 (223.t00007)
03009 Ribosome biogenesis [BR:
ehi03009
]
EHI_169630 (223.t00007)
Enzymes [BR:
ehi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EHI_169630 (223.t00007)
Spliceosome [BR:
ehi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
EHI_169630 (223.t00007)
Ribosome biogenesis [BR:
ehi03009
]
Eukaryotic type
90S particles
Helicases
EHI_169630 (223.t00007)
Pre-60S particles
EHI_169630 (223.t00007)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
Nop14
Tim54
Cas3-like_C_2
AAA_22
SDA1_dom
Motif
Other DBs
NCBI-GeneID:
3404681
NCBI-ProteinID:
XP_650379
UniProt:
C4M8U4
LinkDB
All DBs
AA seq
542 aa
AA seq
DB search
MSKRTAREAFPEEYEEENEEENENIENEEENEEENEEENEEENEEKQERTNKEEINQNKT
KSKEENEEKTKGTTSSFLTDIEYKSLNLSEEIQKALEEAGYTKMTTIQARSIPLLLMGKD
IMAKARTGSGKTLAFLIPIVEILNKIHFQTRNGTGAIIISPTRELAIQTFDVLEKILAHS
ERTRTLIIGGSSKKKEEEALKKGASIVVATPGRLLDHIINTKCFIYRNLKCLVIDEADRI
MEVGFEEEMRQILNRLPKNRQTMLFSATQSEKVDDIANISLKQPVVINVESQSTISTSSK
LEQGYVLIEAKDRFRLLYTFLRKNKNKKTIVFMSSCKAVKFYSDLLNYIDIPVKALHGQL
DQDKRTKVFFEFCKAKEAILITTDIAARGLDIPAVDWIIQVDLPDSPKDYIHRVGRTARA
DTKGRALLFVQPCEIRILEYLKGEKIPLTQYEVPEKKIANIQRELEKLVEKNYYLNTEAK
DGYKAYIMAYNSRSLKDVFNVNDLDIGGLALSFGLTNPPKVQLNILKAPKSSTRFEKKRQ
LK
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaagaacagctcgtgaagcattccctgaagaatatgaagaagaaaatgaagaa
gaaaatgaaaatatagaaaatgaagaagaaaatgaagaagaaaatgaagaagaaaatgaa
gaagaaaatgaagaaaaacaagagcgtacaaataaagaagaaataaatcaaaataaaaca
aaaagtaaagaagaaaacgaagaaaaaactaaaggaaccacatcatcatttttaactgac
attgaatataagtcattaaacctttcagaagaaattcaaaaagcacttgaagaagcagga
tatactaaaatgactacaattcaagcaaggtcaattccattattattaatgggaaaagat
attatggcaaaagctagaactggttcaggtaagactttagcatttttaattcctatagtt
gaaattttaaataaaatccatttccaaacaagaaatggaacaggtgctatcattatttca
ccaactagagaacttgctattcaaacatttgatgtacttgaaaaaatattagctcattca
gaaagaacaagaacattaattattggtggaagtagtaaaaaaaaggaagaagaagcttta
aaaaaaggtgcttcaattgttgttgcaacaccaggtagattattagatcatattattaat
actaaatgttttatttacagaaatttaaagtgtttagtaattgatgaagctgatagaatt
atggaagttggatttgaagaagaaatgagacaaatattaaatagattaccaaagaataga
caaacaatgttatttagtgctactcaatcagaaaaagttgatgatattgctaatatttca
ttaaaacaacctgttgttattaatgttgaaagtcaatcaacaatatccacatcaagtaaa
ttagaacaagggtatgttcttattgaagcaaaagatagatttagattattatatacattt
ttaagaaagaataaaaataaaaaaacaattgtttttatgtcttcatgtaaagctgttaaa
ttttatagtgatttattgaattatattgacataccagttaaagcacttcatggacaatta
gatcaagataaaagaacaaaagtattttttgaattttgtaaagcaaaagaagctatttta
attaccactgatattgctgctcgtggattggatattcctgctgttgattggattattcaa
gttgaccttcctgattcaccaaaagactatattcatagagtgggtagaacagctcgtgca
gatactaaaggacgtgcacttttatttgttcaaccttgtgaaatacgtattttagaatat
ttaaaaggagaaaagattccattgactcaatatgaagttcctgaaaaaaaaattgctaat
attcaaagagaattagaaaagttagttgaaaaaaattattatttaaatactgaagcaaaa
gatgggtataaggcttatattatggcatataacagtcgttcattgaaagatgtattcaat
gtaaatgatcttgacattggaggacttgcactttcatttggactaacaaatccaccaaaa
gttcaattaaatatacttaaagcaccaaagagtagtactcgatttgaaaagaaacgacaa
cttaaatga
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