KEGG   Entamoeba histolytica: EHI_170100
Entry
EHI_170100        CDS       T00238                                 
Symbol
19.t00035
Name
(RefSeq) WD domain containing protein
  KO
K14549  U3 small nucleolar RNA-associated protein 15
Organism
ehi  Entamoeba histolytica
Pathway
ehi03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ehi00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    EHI_170100 (19.t00035)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ehi03009]
    EHI_170100 (19.t00035)
Ribosome biogenesis [BR:ehi03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    EHI_170100 (19.t00035)
SSDB
Motif
Pfam: UTP15_C WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 WD40_WDHD1_1st Beta-prop_TEP1_2nd EIF3I Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_Vps41 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st NBCH_WD40 WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_RIG_2nd B-prop_COPA_B_2nd Beta-prop_WDR19_1st Beta-prop_WDR75_2nd Beta-prop_EIPR1 eIF2A Beta-prop_IP5PC_F PEP5_VPS11_N BBS2_Mid WDR54 CsiV
Other DBs
NCBI-GeneID: 3410281
NCBI-ProteinID: XP_655980
UniProt: C4M1D2
LinkDB
AA seq 486 aa
MRRAQFTLFKAPHEKRDNELEGKYWDDFTPVSSYTYPSPKCIRFSPSQKQTFAVCSGMNV
FVHSSTESQPKVITRHKDFVYTCEYRNDGALISTGCADGKVRVFDSTNKTLLRTLSGHSA
AVRTVCWGKEMLYSSGDDMVVKAWDFTTKSVIGSYANHTDSVRSIVQCPTNPFLIASGSY
DHTVVLYDTRSKNSINVFKHKNPVEDIVFHPVGTLIAVANGQMITVWDSTTGSQISDYSY
HTNLVTNILFDTDGNRLFSSSLDCSINVYETTNYSKLHNIVYPSPILSFDMNKDSTAFSV
GLTNGEVILFAKQQPQQTENHAASSAKYFFQGKTQTSEEKKEPAINKTQSDISVNIRKFD
YDDALDKALATKDETIIISVIREILYRNGLKIALSRRDENTLEPLMTFLINTLPSPLHTK
ILVEVMSQLLDLYAQDLGKSVVFDEMFFKMQKRLEKEIQLNKNMQQLLGQIDLIIGAADC
ARSKSD
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgagaagagctcaattcacattgtttaaagcacctcatgaaaaaagagataatgagtta
gagggaaagtattgggatgattttacacctgtttcttcttatacatatccttctcctaaa
tgtattagattttctccttctcaaaaacaaacatttgccgtatgtagtggaatgaatgtg
tttgttcattcaagtacagaaagtcaacctaaagtaattactcgacataaagattttgtt
tatacttgtgaatatagaaatgatggagccttaatcagtactggatgtgcagatggtaaa
gtacgtgtatttgattcaactaataaaacattattaaggacattgtctggtcattctgct
gcagtaagaacggtttgttggggtaaagaaatgttatattctagtggagatgatatggta
gttaaagcatgggactttactactaagtcagtcattggttcatatgccaatcatacagat
tctgttcgttctatagttcaatgtccaacaaatccatttcttattgcgtctggatcgtat
gatcatacagttgttttgtatgatacacgttcaaaaaattcaattaatgtatttaaacat
aaaaatccagtcgaagatattgtatttcatccagtcggtactttaattgctgttgctaat
ggacaaatgataacagtatgggattctactacaggttcacaaatttcagattatagttat
catacaaaccttgtaactaatattctttttgataccgatgggaatagattattctcttca
tcattagactgttcaattaatgtttatgaaacaacaaattatagtaaattacataatatt
gtctatccatcaccaattctttcatttgatatgaataaagactctactgctttttctgta
ggattaacaaatggagaagttattttatttgcaaaacaacaaccacaacaaacagagaac
catgccgcatcatcagcaaaatatttcttccaaggtaaaacccaaacatcagaagaaaaa
aaagaaccagcaattaataaaactcaaagcgacatttctgtaaatatcagaaaatttgat
tatgatgatgctcttgataaagcattagcaacaaaagatgaaacaattattatttctgtt
ataagagaaattttatatagaaatgggttgaaaattgcattatcccgtcgtgatgaaaat
acattagaacctttaatgacattcttaataaatacccttccaagtccattacatactaaa
attcttgttgaggttatgtctcaattattagacttatatgctcaagaccttggtaaaagc
gttgtttttgatgaaatgttctttaaaatgcaaaaaagactcgaaaaagaaattcaacta
aataaaaatatgcaacaacttcttggtcaaattgacttaattattggagctgcagattgt
gctagaagtaaaagtgattga

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