Entamoeba histolytica: EHI_175030
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Entry
EHI_175030 CDS
T00238
Symbol
86.t00001
Name
(RefSeq) DEAD/DEAH box helicase
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
ehi
Entamoeba histolytica
Brite
KEGG Orthology (KO) [BR:
ehi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehi03019
]
EHI_175030 (86.t00001)
03041 Spliceosome [BR:
ehi03041
]
EHI_175030 (86.t00001)
03036 Chromosome and associated proteins [BR:
ehi03036
]
EHI_175030 (86.t00001)
Enzymes [BR:
ehi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EHI_175030 (86.t00001)
Messenger RNA biogenesis [BR:
ehi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
EHI_175030 (86.t00001)
mRNA cycle factors
Common to processing body (P body) and stress granule
EHI_175030 (86.t00001)
Spliceosome [BR:
ehi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
EHI_175030 (86.t00001)
Chromosome and associated proteins [BR:
ehi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
EHI_175030 (86.t00001)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
HEM4
NST1
Motif
Other DBs
NCBI-GeneID:
3407642
NCBI-ProteinID:
XP_653330
UniProt:
C4LZM8
LinkDB
All DBs
AA seq
578 aa
AA seq
DB search
MAYVPPHLRNKEKTTIMKGEPTPISPCFSKKGAYKSDHIPITSRTPQPSRSSSTIYRSDT
PTFTRRNNRSTNKDRWYGYRDSREDPKRLEKRNQWLEETKEEREKLIDVTVSYENLEIEV
TGKDLPKDTIETFYDIDLGEELDHNIFKAGFYHPMPVQKATIPIVLDKRDLMSCAQTGSG
KTAAFLFPIISDILKNPPMPRQSNFSHRVTVFPVALILAPTRELGQQIYEEAVRFTEDTP
IRSVCVYGGSDSYTQIQEMGKGCDILVATPGRLLYFTEKKIVSLSSVRYLIFDEADRMLD
MGFEPQIREICEDNEMPPVGKRQTLMFSATFPKQIQRLAADFLDDYVFITVGRAGSTVES
IQQIILWVEEEIKQEAILDVLGEFAGKGQKTVIFVETKRGADILENYLYDHGYKVDSIHG
DRSQADRDFSLKRFKENVIQLLVATDVASRGLDIPDIEVVINYDMPNEIESYVHRVGRTG
RAGKKGTAITFINEKTQNLIPPLVSLLEEAKQTIPDWLEEKAQEYRKPFGSKRGRKGGYN
RRGAGRFGGRDRRYERRRDNEWDNARSVSTPIKPHMFD
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcttacgtaccaccacatttaagaaacaaagagaaaacaacaataatgaaaggagaa
cctactccaattagtccatgctttagtaaaaaaggagcatataaatcagaccatatccca
ataacatcaagaactcctcaaccatctcgtagttcatcaacaatttatagaagtgataca
cctacatttacacgtagaaataatagaagtacaaataaagatagatggtatggttatagg
gattctagagaagatccaaaaagattagaaaaaagaaatcaatggttagaagaaacaaaa
gaagaacgagaaaaattgattgatgtaactgtctcatatgaaaatcttgaaatagaagtt
acaggaaaagatcttccaaaagatacaatagaaacattttatgatattgatttaggtgaa
gaattagatcataacatttttaaagctgggttttatcatccaatgccagtccaaaaagca
actattccaatagttttagataaacgtgatttaatgtcttgtgcacaaactggatctggt
aaaacagcagcattcctttttccaattatttcagatattcttaaaaatccaccaatgcca
agacaatcaaatttttcacatagagttactgtgtttcctgttgcattaattcttgcacca
acaagagaattaggacaacaaatttatgaagaagcagttagattcacagaagatacccca
attagatcagtatgtgtttatggagggtctgattcatatactcaaattcaagaaatggga
aaaggatgtgacattcttgttgctactccaggaagattattatattttactgagaagaaa
attgtgtcattatcttctgttagatatcttatttttgatgaagctgatagaatgcttgat
atgggatttgaaccacaaattagagaaatttgtgaagataatgaaatgccacctgttgga
aaacgtcaaacattaatgttttcggctacttttccaaaacaaattcaaagacttgctgca
gatttcttagatgactatgtctttattactgttggaagagcaggaagtactgttgagtca
attcaacaaattattttatgggttgaagaagaaataaaacaagaagcaattttagatgtt
ttaggagaatttgcaggaaaaggtcagaaaacagttatttttgttgaaacaaagcgaggt
gctgatatactagaaaattacttatatgatcatggatataaagtagacagcattcatgga
gatcgttctcaagccgatcgtgatttttcattgaaaagatttaaagaaaatgttattcaa
ctacttgttgcaactgatgttgcttctagaggattagacattccagacattgaggttgtc
attaactatgatatgccaaatgaaattgagagttatgtccatcgtgttggaagaactgga
cgggctggtaaaaaaggaactgcaatcactttcattaatgaaaaaacccaaaatttaata
ccaccattagtctcattattagaagaagcaaaacaaacaataccagactggttagaagaa
aaagcacaagagtatagaaaaccatttggctcaaaaagaggtagaaaaggtgggtataat
agaagaggagctggaaggtttggaggaagagatagaagatatgaaagaagaagagacaat
gaatgggataatgctagatcagttagtacaccaataaaacctcatatgtttgattaa
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