Entamoeba histolytica: EHI_176970
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Entry
EHI_176970 CDS
T00238
Symbol
192.t00007
Name
(RefSeq) cdc48-like protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ehi
Entamoeba histolytica
Pathway
ehi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ehi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
EHI_176970 (192.t00007)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehi03019
]
EHI_176970 (192.t00007)
03009 Ribosome biogenesis [BR:
ehi03009
]
EHI_176970 (192.t00007)
04131 Membrane trafficking [BR:
ehi04131
]
EHI_176970 (192.t00007)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ehi04147
]
EHI_176970 (192.t00007)
Messenger RNA biogenesis [BR:
ehi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
EHI_176970 (192.t00007)
Ribosome biogenesis [BR:
ehi03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
EHI_176970 (192.t00007)
Membrane trafficking [BR:
ehi04131
]
SNARE
SNARE associated proteins
Others
EHI_176970 (192.t00007)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
EHI_176970 (192.t00007)
Exosome [BR:
ehi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EHI_176970 (192.t00007)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
AAA_33
AAA_22
CDC48_2
AAA_14
AAA_5
AAA_28
Mg_chelatase
RNA_helicase
nSTAND3
NPHP3_N
AAA_17
TIP49
AAA_18
IstB_IS21
ABC_tran
Vps4_C
NACHT
AAA_7
ATPase_2
Parvo_NS1
DUF815
TsaE
Sigma54_activat
Rad17
NB-ARC
Viral_helicase1
AAA_lid_PRS2_C
AAA_24
Zeta_toxin
Molydop_binding
RCF1-5-like_lid
Motif
Other DBs
NCBI-GeneID:
3405211
NCBI-ProteinID:
XP_650911
UniProt:
C4LY22
LinkDB
All DBs
AA seq
772 aa
AA seq
DB search
MSQDEQVQVPMNEEEPKKIIVKKHRLIVEESKEDDMSIVYMNPQRMEELNFFEGDSILIK
GKRRKSTVCIVMAEEGLTENMIRLHRMTRYNLRVKLGDVVGVETPQNVPYAIKIHVLPID
DTVEGITGDLFETYIRPYFSDVFRPIKKDDHFLCHGGMRTVEFKVVDIDPSPYALVVNDT
IIHCEGEPIKREDEERPDDLGYDDIGGCRRQLGQIREMVELPLRHPQLFQAIGIKPPKGV
LLYGPPGCGKTMIARAVANETGVFLILINGPEIMSKMAGESEGNLREAFAEAEKNAPALI
FIDEIDSIAPKRDKAQGEVERRVVAQLLTLMDGMKSRSNVIVMAATNRPNAIDSALRRFG
RFDREIDIGVPDETGRLEILNIHTKKMKIADDVDLLQIAKETHGYVGADLAQLCTEAAML
CIRENMAHVDVEADSIPVEVLNGMKVTMEHFRNVMKTCTPSALRETVVEIPNVKWEDIGG
LEDVKRELKEVVQYPVEFPDKFRKFGMEPSKGVLFFGPPGCGKTLLAKAVASQCKANFIS
IKGPELLTMWYGESEANVRDVFDKARQAAPCVLFFDELDSIGRARGGGAGDAGGSADRIL
NQLLTEMDGVGKKKQVFIIGATNRPDILDPALLRPGRLDQLLFIPLPDKASRISILQAKL
RNSPVAPDVDLDWIAEHTENFSGADLAEIVQRACKEAIRDTINELAVAEAEKAAQPEDQK
MEIEVKPMIKVKHFNAALRDARRSVSDIEIQRYNMYAETLLQRRSIGNFSFN
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagacgaacaagttcaagttccaatgaacgaagaagaaccaaaaaagataatt
gttaaaaaacaccgtcttattgtagaagaaagtaaagaagatgatatgtcaattgtatat
atgaatccacaaagaatggaagaattgaatttctttgaaggtgatagtattttaattaaa
ggaaaaagaagaaaaagtacagtttgtattgttatggcagaagaaggattaacagaaaat
atgatcagacttcatcgtatgactagatacaacttaagagttaagttaggtgatgtagtt
ggagttgaaaccccacaaaatgttccttatgctattaaaattcatgtattaccaattgat
gatactgtagaaggaattactggagatttatttgaaacatatatccgaccatatttcagt
gatgtttttagacctattaagaaagatgaccattttttgtgccatggaggtatgagaaca
gttgaattcaaagttgttgatattgacccatcaccatatgcacttgttgtaaatgacact
attattcattgtgaaggagaaccaattaaaagagaagatgaagaacgaccagatgatctt
ggatatgatgacattggagggtgtagaagacaacttggacaaattcgagagatggtagaa
ttaccattaagacatccacaattattccaagctattggtattaaaccaccaaaaggagtg
ttattatatggaccaccaggatgtggtaaaacaatgattgcacgagctgttgctaatgaa
acaggagttttcttaatattaattaatggaccagaaattatgagtaaaatggcaggagaa
tcagaaggtaatttaagagaagcatttgcagaagcagaaaagaatgcaccagcacttatt
tttattgatgaaattgattctattgcaccaaaaagagataaggcacaaggagaagttgag
agaagagttgttgcacaattattaacacttatggatggtatgaaaagtaggtcaaatgtt
attgttatggcagctactaatcgaccaaatgctattgattcagcattaagaagatttggt
agatttgatagagaaatagatattggagttccagatgaaacaggaagacttgaaattctt
aatattcacactaaaaaaatgaaaattgcagatgatgttgatttactccaaattgctaaa
gaaacacatggatatgttggagctgatttagcacaattatgtactgaagctgctatgtta
tgtattagagaaaatatggcacatgttgatgttgaagcagattcaattccagttgaagta
ttaaatggaatgaaagttacaatggaacattttagaaatgtgatgaaaacatgtacacca
tcagcattaagagaaacagttgttgaaataccaaatgtaaaatgggaagatattggagga
cttgaagatgttaaacgagaattaaaagaagttgttcaatatcctgttgaatttcctgac
aagtttagaaagtttggaatggaaccatcaaaaggagttcttttctttggaccaccagga
tgtggtaaaacacttcttgctaaagcagttgcttcacaatgtaaagccaattttatttca
attaaaggaccagaattactaacaatgtggtatggagaatcagaagctaatgttcgtgat
gtttttgataaagcaagacaagcagcaccatgtgtattattctttgatgaattagattct
attggaagagcaagaggaggaggagctggagatgctggaggatctgcagatagaatttta
aatcaattattaactgaaatggatggagttggaaagaaaaaacaagtttttattattgga
gctactaatagacctgatattttagacccagcattattaagaccaggacgacttgaccaa
ttattatttattccattacctgacaaagcatcaagaatatcaattctacaagctaaatta
agaaattcacctgttgcaccagatgttgatttagactggattgctgaacatactgaaaat
ttctctggtgctgacttagcagagattgttcaaagagcttgtaaagaagctattagagac
actattaatgaattagctgttgctgaagcagaaaaggcagcacaaccagaagatcaaaaa
atggaaatcgaagttaaaccaatgattaaagttaaacactttaatgctgctttaagagat
gcaagaagatcagtctctgatattgaaattcaaagatacaatatgtatgcagaaacactt
cttcaaagaagaagcattggtaattttagtttcaattga
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