Entamoeba histolytica: EHI_184560
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Entry
EHI_184560 CDS
T00238
Symbol
391.t00003
Name
(RefSeq) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
ehi
Entamoeba histolytica
Brite
KEGG Orthology (KO) [BR:
ehi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ehi03016
]
EHI_184560 (391.t00003)
Enzymes [BR:
ehi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
EHI_184560 (391.t00003)
Transfer RNA biogenesis [BR:
ehi03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
EHI_184560 (391.t00003)
Prokaryotic type
tRNA splicing ligases
EHI_184560 (391.t00003)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
UDPG_MGDP_dh_C
Motif
Other DBs
NCBI-GeneID:
3403072
NCBI-ProteinID:
XP_648794
UniProt:
C4M6T2
LinkDB
All DBs
AA seq
535 aa
AA seq
DB search
MAKSRYSRKNKGKKLQRAQQNTVSTEEKPEQEVETIDFNGFQIPKVYDGKFERKPMELEI
KKGFVEGMNGDAKIFCNDDLLNLLTFEMIKDISNNYPSCVRQTANAATLPGVVGSLAMPD
AHSGYGFSIGGVVAMRLDDPEAVICPGGVGFDINCGVRLIRTNLQREDIEQHKARLADEL
FKQIPSGVGTQAQIAFSPEDFDSIMKEGLEFLVENGYAWEEDLNHCEEHGKIANADPSLV
SNSAKSRGYKQVGTLGSGNHYLEVQVVDEIMDVEAAKAMGITEIGQVCIMVHCGSRGLGH
QVCQDYINLCMKSGICNPVDKQLTGVPFNSPIGQQYYSAMNCCANFAFANRGMITYRIRQ
AFETVLRMKPKKMDMHLVYDVCHNIAKVEEHDVDNKKVQCIVHRKGATRAFPPQHPDISE
DYKEIGQPAIIGGSMGTCSYVLVGTQEGMKKSFGSTCHGAGRKMSRTKAMDNLTSKDVIN
RMKEMGIELRITDPKLAAEEADEAYKDVTEVVETCQAANISKIVLRLKPLIVIKG
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaagtagatattcaagaaagaataaaggaaagaaattacaaagggctcagcaa
aatactgtttctacagaagaaaaacctgaacaggaagttgagacaattgattttaatggc
ttccaaattcctaaagtttatgatggaaaatttgaaagaaaaccaatggagttagaaatc
aaaaaaggttttgtagaaggaatgaatggagatgccaaaatcttttgtaatgatgattta
ttaaatttattaacttttgaaatgattaaagacatttctaataattacccttcttgtgta
agacaaacagctaatgcagccactcttccaggggtagttggttcacttgctatgccagat
gcacatagtggttatggattttctattggaggagtagtagcaatgagacttgatgatcct
gaagcagtaatttgtccaggaggagttggatttgatattaattgcggtgtaagattaata
agaactaatttacaaagagaagatatagaacaacacaaagctcgtttggctgatgaatta
tttaaacaaatcccaagtggagttggaacacaagcacaaattgcctttagtcctgaagac
tttgattctattatgaaagaaggattagagtttttagttgaaaatggatatgcatgggaa
gaagatttaaatcattgtgaagaacatggaaaaattgctaatgcagacccatcattagtt
tctaactcagctaagtctcgaggatataaacaggtagggacattaggaagtggaaatcat
tatttagaagttcaagttgttgatgaaattatggacgtggaagcagctaaagcaatgggt
attactgaaattggacaagtctgtattatggtccattgtggaagcagaggattgggacat
caagtgtgtcaagactacattaacttatgtatgaaatctggaatttgtaatccagtagat
aaacaattaactggtgttccatttaattcaccaataggacaacaatactacagtgctatg
aattgttgtgctaattttgcatttgcaaataggggaatgattacttatagaattcgtcaa
gcctttgaaacagttcttagaatgaaaccaaaaaaaatggatatgcatttggtttatgat
gtttgtcataacattgctaaagtagaagaacatgatgtagataataaaaaagttcaatgc
attgttcacagaaaaggtgctactcgtgcttttccacctcaacaccctgatatttcagaa
gactataaagaaattggacaaccagcaattattggaggaagcatgggaacttgttcttat
gtgttagttggaactcaagaaggaatgaaaaaatcatttggttcaacttgtcatggagca
ggtcgtaaaatgagtagaacaaaagctatggacaatttaacttcaaaagatgtaattaac
agaatgaaagaaatgggaattgagttgagaattactgacccaaagcttgctgcagaagaa
gctgatgaagcatataaagatgtaactgaagttgtagaaacttgtcaagcagcaaatatt
tcaaaaattgttcttcgtttaaaaccattaatagttattaaaggttag
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