Entamoeba histolytica: EHI_198960
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Entry
EHI_198960 CDS
T00238
Symbol
39.t00053
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ehi
Entamoeba histolytica
Pathway
ehi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ehi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EHI_198960 (39.t00053)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ehi03021
]
EHI_198960 (39.t00053)
03036 Chromosome and associated proteins [BR:
ehi03036
]
EHI_198960 (39.t00053)
Transcription machinery [BR:
ehi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
EHI_198960 (39.t00053)
Coactivators
SAGA/TFTC/STAGA complex
EHI_198960 (39.t00053)
Chromosome and associated proteins [BR:
ehi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
EHI_198960 (39.t00053)
STAGA complex
EHI_198960 (39.t00053)
TFTC complex
EHI_198960 (39.t00053)
SAGA complex
EHI_198960 (39.t00053)
SLIK complex
EHI_198960 (39.t00053)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_HPS5
WD40_RFWD3
PEP5_VPS11_N
RMC1_N
Beta-prop_IP5PC_F
Beta-prop_VPS8
Beta-prop_SPT8
Beta-prop_IFT80_2nd
KNTC1_N
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
VPS8_N
eIF2A
Beta-prop_Vps41
Cytochrom_D1
Beta-prop_RIG_1st
Beta-prop_Nup120_160
PROPPIN
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
3409293
NCBI-ProteinID:
XP_654985
UniProt:
C4LWU2
LinkDB
All DBs
AA seq
360 aa
AA seq
DB search
MLPYTENIIQKPSEYTYFKFSQKTQERIYEDEQNRILIDEESLPSTAFFTFFNSQNVVNS
VNFSDDGHLISVGCSDSSIRLYDFKKTQVVNGMNPQAKLLGHCGPVFSTNNSPDFKWLVS
GSEDCSVRLWSLDYPSCIMSFNEHDGPVWDVQYCPLEYYMLSSSYDKTARLWTSKQNKSV
RIFGGDGGHSEDVTCSVFTPDALMVITGSADKTIKIWDVGKGKKMADLTGHDASITSLAI
SSTGRYLASGDEKGSVILWDIKYGEHVKKIKMLKTSNQPIISMAFSNAVIILVTCCNENY
ISLWNIQEALHETESKHKLAMNSADNYLIKQYNTKDTPVIDVQFTRRNLLLAAGIYNSPE
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgttaccttacactgaaaacattattcaaaaaccatcagaatatacttactttaaattt
agtcaaaaaacacaagaacgaatatacgaagatgaacaaaaccgaattcttattgatgaa
gagtctcttccatcaacagcatttttcacattttttaattctcaaaacgttgttaattca
gtcaactttagtgatgacggtcatttaatatcagttggatgttcagactcatcaattcga
ttatatgactttaaaaaaacacaagttgtgaatggaatgaacccacaagcaaaattacta
ggtcattgtggtcctgtgttcagcactaataactcacctgatttcaaatggcttgtaagt
ggttcagaagattgttcagtaagactctggtcattagattatccatcttgtatcatgtca
tttaatgaacatgatggaccagtctgggatgtacagtattgtccattagaatattatatg
ttaagttcatcatatgataaaacagctagactatggacatctaaacaaaacaaaagtgta
cgtatatttggaggagatggtggacatagtgaggatgttacatgctctgtattcacacct
gatgcattgatggtcatcacaggatcagcagataaaacaataaaaatatgggatgttggg
aaaggaaagaaaatggcagatttaacaggacatgatgctagtattacttcattggctatt
agttcaacaggaagatatcttgcatcaggagatgaaaaagggtcagttattttatgggat
attaaatatggagaacatgttaagaaaattaaaatgttgaaaacaagtaatcaaccaatt
atttctatggcattttctaatgcagttatcattcttgttacttgttgtaatgaaaattat
attagtctttggaatattcaagaggcattacatgagacagaaagtaaacacaaattagca
atgaatagtgcagataattacttgattaaacaatataatactaaagatactccagtcatt
gatgttcaattcacacgtagaaatttattattagcagctggtatttataattcaccagaa
taa
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