Ehrlichia sp. JZT12: K6025_01545
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Entry
K6025_01545 CDS
T10635
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
ehj Ehrlichia sp. JZT12
Pathway
ehj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ehj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K6025_01545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehj03019
]
K6025_01545
Messenger RNA biogenesis [BR:
ehj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K6025_01545
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
Lactamase_B_2
RMMBL
RNase_J_C
Anti-Pycsar_Apyc1
Lactamase_B_6
Transpos_assoc
Motif
Other DBs
NCBI-ProteinID:
WDM85536
LinkDB
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Position
complement(391506..393128)
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AA seq
540 aa
AA seq
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MNTDDLLFVPLGGVGQIGMNVNLYHFKGKWIIIDFGAGFADDNMPGIDMIVADISFIRKN
RKNLLGIVLTHAHEDHIGGIQYLWSDLQCPIYATKFTASLLKAKLNEYQLKVPITEIDIT
KELKLGPFNLEFINLTHSIPEMNAIALHTEKGVVVHTGDWKLDDNPVIGPISNTQRLKEL
GDKGVLALVCDSTNIFTKNKSGSEGELEKSLFNIIKTCNQKVAISLFASNIARINTIAKV
SAKLDRKIAILGKSLIRIIHVAQDSGYLEDIPEFIDINQANKLPRNQILLLCTGCQGERL
AATAKLANNSHLLTKLEHGDTIIFSSKIIPGNEKRIYNVFNKFVNMGINVITEFMEHVHV
SGHPSRNEVCTMYSLVRPKLSIPVHGEYIHMYEHAKIAKQCNVDKAIIVHPGDVIEITEG
KKINSVKSGYFGIDGNFLHHPQGNVISMRKRMRDSGIIIVTLVLNKRKELLKEPRIFAPG
VLDYYDSQSIIKKIATKISSEFYSKKINNIKHCVENIIFNALKYDIKSKPFIEVQVEYID
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaatactgatgatttgttgttcgtcccattaggtggagttggacaaatagggatgaat
gtcaatttatatcactttaaaggaaaatggataattatcgatttcggagcagggtttgct
gatgataacatgccaggaatagatatgattgtcgcagatattagtttcattagaaaaaac
agaaaaaatttacttggtatagttttaacacatgcccatgaagatcatataggaggaata
caatatctgtggagtgatctacaatgtccaatatatgcaacaaaatttacagcctcttta
ctaaaagcaaaactgaacgaataccaattaaaggtccctataacagaaattgatataaca
aaagaattaaaattaggtccttttaatttagaatttataaatttgacacattcaatacca
gaaatgaatgcaatagcattacacacagaaaaaggtgtggtggtacacacaggagattgg
aaactagatgataatccagttataggccctatatcaaacacacaaagactaaaagaacta
ggagataaaggagttttagcccttgtttgtgattcaacaaatatcttcactaaaaataaa
tctggatcagaaggtgaactagaaaaaagtctattcaacattataaaaacttgcaatcaa
aaagttgctatatccttatttgcttccaatatcgcacgaattaatacaatagcaaaagtt
tctgcaaagttagacaggaaaatagcaatattaggaaaatctcttatcagaattatacat
gttgcacaggatagcggttatttagaagatattccagagtttattgatataaatcaagca
aacaaactaccacgaaatcaaatcttactcctttgcactggttgtcaaggtgaaagatta
gcagctactgctaaacttgctaataattcccatttattaacaaaactagaacatggagat
accataattttttcttccaagatcattccaggcaatgaaaaacgtatatacaatgtattc
aacaaatttgttaacatgggaattaatgtaatcacagagtttatggaacatgttcatgta
tcaggtcacccatcaaggaatgaagtatgtactatgtactcactagtcagacctaagtta
tccattcctgtacatggagaatatatacatatgtatgaacatgcaaaaattgctaaacaa
tgtaatgttgacaaagcaatcattgttcatccaggagacgtaatagaaataacagaagga
aaaaaaattaattctgtaaagtcaggttattttggtattgatggcaacttcttgcaccat
ccacaaggaaacgtcatatctatgcgaaaaaggatgagagattcaggaataatcatagta
acactcgttctaaataagagaaaagaattactgaaggaaccgagaatttttgctccagga
gtattagattattatgatagccaatccattattaaaaaaattgcaactaaaataagcagt
gaattttattctaaaaaaataaacaatataaaacattgtgtagaaaatataatttttaat
gctctaaaatatgatattaagagtaagccattcattgaagtacaagtagaatacatagat
taa
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