Ehrlichia sp. JZT12: K6025_03250
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Entry
K6025_03250 CDS
T10635
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ehj Ehrlichia sp. JZT12
Brite
KEGG Orthology (KO) [BR:
ehj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ehj03032
]
K6025_03250 (gyrB)
03400 DNA repair and recombination proteins [BR:
ehj03400
]
K6025_03250 (gyrB)
Enzymes [BR:
ehj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
K6025_03250 (gyrB)
DNA replication proteins [BR:
ehj03032
]
Prokaryotic type
DNA Topoisomerases
K6025_03250 (gyrB)
DNA repair and recombination proteins [BR:
ehj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K6025_03250 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
HATPase_c_3
Toprim_4
KH_PARP14_1
DHR-2_Lobe_A
Motif
Other DBs
NCBI-ProteinID:
WDM85759
LinkDB
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Position
846263..848659
Genome browser
AA seq
798 aa
AA seq
DB search
MDNYNASSITVLKGLDAVKKRPGMYIGDVADGSGLHHMVYEVIDNSIDEALAGFCNRIDI
IIQNDGAVSVIDNGRGIPVDMHQDEGISAAEVIMTQLHAGGKFDHNSYKVSGGLHGVGIS
VVNALSSWLELTIWRDNKEYFMRFENGITVKPLSVVNDNITKKGTKITFLPSKDIFSFIN
FNYATLENRIRELSFLNSNINMNLKDLRSNPALNSSFGLKGSTKAGDIEDKGTSGFVKYL
DRNKNAVTKIVHIEGIVLEHGISLELSMHWNDSYYENMLCFTNNIRQRDGGTHLAGFRSA
MTRCINNYATNEGFLKKAKVSILGEDVREGLTCVLSIKLPDPKFSSQTKDKLVSSEARTA
VENIVYEKLTNIFETNPKLATSIMDRIIRSAKGREAARKARDLIKSKHGFDFTILPGKLA
DCQEKSPELSELFIVEGNSAGGSAKQGRDRRSQAVLSLKGKILNVERASLDRILSSAEIA
SLITAIGTNIGTENFDIEKVRYHKVIIMTDADVDGSHIRTLLLTFFFRYMRKIIERGYLY
IAQPPLYKVTKHKKEFYIKNDDMLHDYIINNAVKDLTLTGNKNYSGDSLSKLLHQCINIS
KVTKAYNRVIPQNVLESLIIFFKKYSFESANAISDHLNKIFCEYEWSVEIPEKDEISIYR
LSHGLVDKYYIDSSIMGSEGIVNVINMCNGIEEVFDNTPILSTKDNNIKIDSPTSLVYNI
IEFGKKDMTLQRFKGLGEMNADQLWDTTLNPDTRTLLKIKISDCEAADSIFSVLMGDFVE
PRRDFINNNALNVQNIDA
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggacaattataatgcaagctcaattactgttttaaaagggcttgatgcagtaaagaaa
agaccaggtatgtatattggtgatgttgctgacggttctggattacatcatatggtatat
gaggtgattgataattctatagatgaagcacttgccggtttttgtaacagaatagatatt
attattcaaaatgatggtgcagtttctgttatagataatggtcgaggtataccggtagat
atgcatcaagatgagggtatatctgctgctgaagtaattatgacacagttgcatgctggt
ggtaagtttgaccataatagttataaagtttcaggtggtcttcatggtgttggaatatcg
gttgtaaatgctctttcaagttggttggaattaactatatggcgcgataataaagaatat
ttcatgcgttttgaaaatggtataacagttaagccattatctgttgttaatgataatatt
acaaaaaaaggaactaaaattactttcttaccatcgaaagatattttttcgtttattaat
tttaattatgcaacattagaaaatcgtataagagagttatcattccttaattctaatatc
aatatgaatctaaaagatctaaggagtaacccagcattaaattcatcttttggtttaaaa
ggtagtactaaagctggtgatatagaagataaaggaacttctggttttgtgaaatatctt
gatcgtaataaaaatgctgtaactaaaattgttcatatagaaggaattgtgcttgaacat
ggaattagtttagaactatcaatgcattggaatgattcttattatgagaacatgctatgt
tttacaaataatatacgacaaagggacggaggtactcatcttgcagggtttagatcagct
atgacacgttgtattaataattatgcgacaaatgaaggatttttaaagaaggctaaagta
agcattttaggagaagatgtaagagaaggattaacttgcgtattatcaataaagcttcct
gaccctaagttttcatctcaaactaaagacaaattagtaagttctgaagctagaacagct
gtagagaatatagtatatgaaaaattaacaaatatttttgagactaatcctaagttagca
acaagtattatggaccgaataatcaggtctgctaaagggagagaagctgctcgtaaagca
agagaccttataaagagtaagcatggatttgattttactattttgccaggaaagttagcg
gattgccaagaaaagtctcctgagttatctgaattatttattgtagagggtaattctgca
ggtggttctgcgaaacaaggacgtgatcgacgttctcaggctgtattatctttaaaagga
aaaatattgaatgtggaacgtgcaagtctagaccgtatattatcatcagcagaaatagca
tcactaattactgcaataggtactaatattggaactgagaattttgatatcgaaaaagta
cgttatcataaagtaattattatgacagatgcagacgttgatgggtcacatattagaact
ttattactaacattttttttccgttatatgcgtaaaattatagaaagagggtatttatat
attgctcaacctccactttataaggttacaaaacataaaaaagaattctatataaaaaat
gatgatatgcttcatgattatattattaataatgctgtaaaggatttaactcttactgga
aataaaaattattcaggagatagtttatctaagcttttgcatcaatgtataaatattagt
aaggtaaccaaggcttataatagagtaattcctcaaaatgttttagaatcgttaattatt
ttctttaaaaagtatagttttgagtctgcaaatgcaatatctgatcacctgaataaaatt
ttttgtgaatatgagtggagtgttgaaatacctgagaaagatgaaataagtatatatagg
ttgtctcatgggttagttgataaatattatattgatagttctataatgggttcagagggt
attgtaaatgttattaatatgtgtaatggaattgaagaagtgtttgataatactccaatt
ttatctacaaaagataataacataaaaatagattcacctacttccttggtatacaatatt
attgaatttggtaaaaaggatatgactctacagagatttaaagggttgggagagatgaat
gcagatcaattatgggatactacattaaatcctgatacaagaactttgcttaaaattaag
atatctgattgtgaagctgctgattcaatattttcagtattaatgggtgattttgtagaa
ccaagacgcgatttcattaataataatgctttaaatgtgcagaatatagatgcataa
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