Ehrlichia sp. JZT12: K6025_04025
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Entry
K6025_04025 CDS
T10635
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
ehj Ehrlichia sp. JZT12
Pathway
ehj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ehj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K6025_04025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehj03019
]
K6025_04025
03009 Ribosome biogenesis [BR:
ehj03009
]
K6025_04025
Enzymes [BR:
ehj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
K6025_04025
Messenger RNA biogenesis [BR:
ehj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K6025_04025
Ribosome biogenesis [BR:
ehj03009
]
Prokaryotic type
rRNA processing factors
K6025_04025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
WDM85018
LinkDB
All DBs
Position
complement(1046895..1048727)
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AA seq
610 aa
AA seq
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MSNYNKRILIDAVYQDGIRVAVLRDGQVVEFDQESKNKKCLKGNVYCAVVKRIEPSLQAV
FIEYGANKHGFLPFSEISLDYYNIPEEEKEKLYQVLYEDTDTKSDDEIKSGEDAVPCEGK
DVHEQSDVDSYSEKLTLLKKDNSKSYSKSKLPFYKLYKIQDVIKLDQKLMAQIVKEERGN
KGATFSTFVTLVGRYCIFMPNSGNKNSGISRRIEDADDRRVLKNFLSSIKLPKESGMIIR
TAGSNKSQKEIEQDLSYLQSTWRSIQNSYMNVTVPSLLYIEGDIIKRTLRDYCDENTQDI
IVSGRYAYELAKECVKFMFRNRVRLRVYKGSVPIFSYYKIEPQICELYGNIVNLPSGGYM
VITPTEALVSIDVNSGKMTGEDSIEETAYKTNMEAVKEIARQVNLRGLSGLIVIDFIDML
KYRYCRSVESEIKEAFKYDKAKVQFGYISTFGLMEISRQRVKQSILEANTVQCSHCNGVG
RVRSFESFSGDILRDVRYCANKNRNKLINISVPGQMVEYFFNNKRQHIAEIEEEFSVSVK
LTVNQNPSSISDFSINVENDDVVSKNKDVINVFTVDYKVSEDDELEEEIKKKSNGDIWIK
KWLNRIFSHI
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaattataataaaaggatattaattgatgcagtatatcaagatgggattagagta
gcagtattacgtgatggacaggttgtagaatttgatcaagaatcaaaaaataagaagtgt
ttaaagggtaatgtatattgtgctgtagtaaaacgtatagaaccatctttacaagcggta
tttattgaatatggtgcgaataaacatgggtttctccctttttctgaaatatcattagat
tattataatattcctgaagaagaaaaggaaaaactatatcaggttttatatgaagacact
gatacaaagagtgatgatgagataaaatctggtgaagatgctgttccatgtgaaggtaaa
gatgtccatgagcaatcagatgttgatagttatagtgaaaagttgacattgttaaaaaaa
gataattcaaaaagttatagtaaatctaaattacctttttataagttgtataagatacag
gatgtaataaagcttgatcaaaagttgatggctcaaattgtaaaagaagagcgtggaaat
aaaggagcaactttttcaacttttgttactttagttggtagatattgtatatttatgcct
aattctgggaataaaaatagtggaatatcacgtcgtattgaagatgctgatgataggaga
gttttaaaaaattttttgagttcaataaaattaccaaaagaatctggaatgattattaga
actgctggatctaataagagtcagaaggaaatagagcaggatttatcgtatttacagtca
acttggcgaagcatacaaaatagttatatgaatgttactgttccatcattgttatatatt
gaaggagatataataaaaaggacattacgtgattattgtgatgaaaatacacaagatata
attgtctcaggtagatatgcatatgagttagctaaagaatgtgttaaatttatgtttaga
aatagggtacgtcttagggtttataagggcagtgttcctattttttcttattataaaatt
gaacctcaaatttgtgaactttatggaaatatagtaaatctaccttctggtggatatatg
gttataacgccaacagaagctttagtatcgatagatgtcaattctggtaaaatgacagga
gaagatagtattgaagaaacagcttataaaacaaatatggaagctgtaaaagaaattgcc
agacaggttaatttacgtggattatctggattaatagtaatagattttattgatatgtta
aaatatagatattgtagatcagtagaatctgaaattaaagaggcgtttaaatacgataag
gcaaaggtacagtttggatatataagtacatttggattgatggaaatatcaagacaaaga
gtaaaacaaagtatattagaggcaaatacagtacagtgttcacattgtaatggggtaggt
agagtaagatcttttgaatcgttttctggggatatattacgagatgttagatattgtgct
aataagaatcgtaacaaattaataaatatttctgttcctggacaaatggtggagtatttt
ttcaataacaaacgtcaacacatagctgaaattgaagaagaatttagtgtatcagttaag
ttaactgttaatcaaaatccgagtagtatttctgattttagtattaacgttgaaaatgat
gatgtagtaagtaagaataaagatgtaataaatgtatttactgttgattataaagtttct
gaggatgatgaattagaagaggaaataaagaagaagtctaatggggatatatggataaag
aaatggttaaaccgtatattttcacacatttaa
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