Anaerobutyricum hallii: EHLA_0197
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Entry
EHLA_0197 CDS
T05310
Name
(GenBank) DNA helicase/RNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ehl
Anaerobutyricum hallii
Pathway
ehl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ehl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EHLA_0197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehl03019
]
EHLA_0197
03400 DNA repair and recombination proteins [BR:
ehl03400
]
EHLA_0197
Enzymes [BR:
ehl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EHLA_0197
Messenger RNA biogenesis [BR:
ehl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EHLA_0197
DNA repair and recombination proteins [BR:
ehl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EHLA_0197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
DUF6016
Motif
Other DBs
NCBI-ProteinID:
SOB70965
UniProt:
A0A285PSE2
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All DBs
Position
I:214550..216445
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AA seq
631 aa
AA seq
DB search
MPTGAGKSLCYQVPALMLDGITIVVSPLISLMTDQVKALNQAGVHAAYINSSLTENQIRT
ALFYAAQGRYKIIYVAPERLNTMRFLEFVCQVDISMVTVDEAHCISQWGQDFRPSYVGIA
DFLAQLPKRPVVSAFTATATERVKQDIMGSLRLQNPVTVVTGFDRPNLFFRVVTRKGGKE
TDNSVLNYVKKHEDESGIIYCATKKNVDKIYELLQQYGIAAGHYHAGLSLEERKKNQDDF
TYDRIRVMVATNAFGMGIDKSNVRYVLHYNMPQSLEYYYQEAGRAGRDGEEAECVLFFSK
QDIMINKRLLEYKSTESIESDPQVRRNDYQKLNRMIDYCETQQCLRQFILSYFGDNSPCT
CDKCSNCVVVEDEAEENYIQTKKEKKKAFRLANLTPKGQELFEQLRKCRTELAAEKGVPP
YIICSDKTLTDMCAKCPVDNEDMETVYGMGVQKIQSYGEHFTKIIIDFLEEQSAAGGADA
ETLQLTTELKPEQIEETTGITVETPPARKKKLPFYIAPGKLDEVELTDTCMISELTNRIN
ELCDEEDQKNRKKLTAAFVNTLLIQKGYIEEATEGEEKVKHVTEKGKKAGIKEEERQGKY
GRKYYALIHTRESQEMILGELRDYLSNLQGE
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaggtgcaggaaagtctctgtgttatcaggttccagcactgatgttagacggg
attacgatagtagtttcgccgcttatttccctgatgacagatcaggttaaggcgttaaat
caggccggtgttcatgcggcatatattaatagttcgcttacggagaatcagatacggact
gcccttttttatgcggcgcagggaagatataagattatttatgtagctccagagaggctg
aatacgatgcgttttctggagtttgtatgccaggtggatatttctatggtgacggtggat
gaggcgcattgtatttcccagtggggacaggatttccgtccaagttatgttggaattgcg
gattttcttgcacagttaccaaagcgtccggttgtaagtgcatttactgcaacagcaacg
gaacgagtaaaacaggatattatgggaagtctgcgtttgcaaaatccagtgacagttgtg
acaggatttgaccgaccgaatctgttctttcgcgtagtgacccgaaagggtggaaaagag
accgacaacagtgttcttaattatgtcaaaaagcatgaagacgaaagtggaatcatttat
tgtgcaacgaaaaagaatgtagacaaaatatatgaacttttgcagcagtatggcattgcg
gcagggcattatcatgcaggattatctttagaggaacgaaagaaaaatcaggacgatttt
acctatgaccggattcgtgttatggtagcgacaaatgcatttggaatgggtattgataaa
tcaaatgtccgatatgtgctgcattataacatgccacaaagccttgaatactattatcag
gaagcggggcgtgccggacgtgacggggaagaagcagagtgtgtattattcttttccaag
caggatattatgataaataagaggcttttagaatataagagtacagaaagtatagagagt
gacccgcaggtacggagaaacgattatcaaaagttaaatcggatgattgattactgcgaa
acacaacagtgcctgcgccagtttattttgtcgtattttggggataacagtccatgtact
tgcgataagtgcagcaactgtgtggttgtagaagatgaggcagaggagaattacatccag
accaaaaaggaaaagaaaaaagcgtttcggcttgccaatctgactccgaaagggcaggaa
ttgttcgagcagcttcgtaagtgcaggacagaacttgctgcagaaaaaggagttccacca
tatataatctgttccgataagacattaacagatatgtgtgcaaaatgtcctgtagacaat
gaagatatggaaacagtgtacggaatgggtgtgcagaaaattcaaagttatggggaacat
tttaccaaaatcattatagactttttagaagaacagagtgcagccggtggagcagatgca
gaaactctgcaattaacaacagagttaaaaccagaacaaatagaggaaacaacaggaata
acagtagaaactcctcctgcaagaaaaaagaaactgccattttatatcgcaccgggaaaa
ttagacgaagtggaactgaccgatacctgtatgatttcagaactcacaaaccggattaac
gaactttgtgacgaagaagaccagaaaaaccgcaaaaaactaacagcagcatttgtcaat
accttactgatacaaaaaggatatattgaagaagccacagaaggcgaagaaaaagtaaaa
catgtaacagaaaaaggaaaaaaagccggaatcaaggaagaagaacgacaaggtaagtat
ggaagaaagtattacgcattaattcatacgagggagagtcaggagatgattttgggagaa
cttcgagactatttgtccaatttgcagggagaataa
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