Anaerobutyricum hallii: EHLA_0950
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Entry
EHLA_0950 CDS
T05310
Name
(GenBank) HD/PDEase domain
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ehl
Anaerobutyricum hallii
Pathway
ehl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ehl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EHLA_0950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehl03019
]
EHLA_0950
Messenger RNA biogenesis [BR:
ehl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EHLA_0950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
Vpu
KH_KhpA-B
KH_2
fvmYukDl_N
DUF489
FtsL
Motif
Other DBs
NCBI-ProteinID:
SOB71687
UniProt:
A0A285PR08
LinkDB
All DBs
Position
I:1034797..1036347
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AA seq
516 aa
AA seq
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MSPITVIAILIAVVLTAVISVFATIAYRKSVSEAKVGSAEEKAREILDDALKNAEAKKRE
ALLEAKEEALRAKNDFEKESRERRMELQRYEKRVLNKEEALDRKSDVLEKKEQSLAHKEG
ALEKQKAKVEELHEKRLQELERISGLTSEQAKDYLLKTVEDDVKREMAVMVKEMKTRAKE
EASKKAKEYVVTAIQKCAADHVAETTISLVQLPNDEMKGRIIGREGRNIRTLETLTGVDL
IIDDTPEAVILSSFDPVRREVARIALEKLIVDGRIHPARIEEMVEKAQNEVEQTMREEGE
AAVLEVGVHGIRPELVRLLGKMKYRTSYGQNALKHSIEVAQLSGLIAGEIGEDVRLAKRA
GLLHDIGKAVDQEMEGSHISIGVDLCKKYKESSVVINAVESHHGDVEPTSLIACIVQAAD
TISAARPGARRETLETYTTRLKQLEDIANSFKGVDKTFAIQAGREIRIMVVPEQVSDSDM
ILLARDISKQIENELSYPGQIKVNVIRESRAVDYAK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccaattactgtgattgctattctgattgcagttgttctgactgccgttatttct
gtttttgcaacgatcgcttatcgtaagagtgtttcagaagcgaaagtaggaagtgcggag
gaaaaggcaagagagattcttgatgatgcgttaaagaatgccgaagcaaagaaaagagag
gcattattagaagcgaaagaagaagcgctcagagctaagaatgactttgagaaggaaagt
agagaacgaagaatggagcttcagagatatgagaaacgtgtcctgaataaggaagaagca
cttgatcgtaaatctgatgtattagagaagaaagaacagtctctcgcccataaagaaggc
gctctcgaaaaacagaaagcaaaagttgaagagttgcatgaaaaacgtctgcaggaactg
gaaaggatttcaggattaacctctgaacaagcaaaagattatctgcttaaaactgtcgaa
gatgacgtaaaaagggaaatggcggtcatggtcaaagaaatgaagactagggccaaagaa
gaagcatccaaaaaggcaaaggaatatgtcgtaacagcgattcagaaatgtgcggcagac
catgtagccgagacaacaatttctttagttcagctgccgaatgatgagatgaagggacga
attatcggtcgtgaaggtcgtaatattcgtactttagaaacattgacaggagtcgatctg
attattgatgatactccggaggcagttattttatcaagctttgatccggttcggagagag
gttgcaagaattgctcttgagaagttaattgttgatggaagaattcatccggcaaggatc
gaagagatggtggagaaggcacagaatgaagtagagcagacaatgagggaagaaggagaa
gccgctgttttagaagtaggtgtacatggaattcgtcctgaattggttcgtctgcttggt
aagatgaaatatcgaacaagctacggacagaatgcattgaaacattccatcgaagtagcc
cagttatccggtttaatagctggagagataggcgaagatgtacgtttggcaaaaagagcc
ggattgctccatgatatcggcaaggctgtcgatcaggagatggaaggttctcatatttca
ataggtgtggatttgtgtaagaaatacaaagaatcctctgtcgtaattaatgcagtggaa
tctcaccatggtgatgttgagccaacaagcctgattgcctgtatcgtacaggcagcagat
acgatttctgctgcaagacctggtgccagacgggagacattggaaacttatacgacaaga
ttaaaacagttagaagatatagctaactccttcaagggagttgataagacttttgccatt
caggccggtagagaaattcgaattatggtagttcctgaacaggtaagtgattctgacatg
attttattagcaagggatatttcaaaacagattgaaaatgaattgagttatccgggacag
attaaagtcaatgtgatccgcgaatcgagagcagttgattacgcaaagtaa
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