Anaerobutyricum hallii: EHLA_3012
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Entry
EHLA_3012 CDS
T05310
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ehl
Anaerobutyricum hallii
Pathway
ehl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ehl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EHLA_3012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehl03019
]
EHLA_3012
03009 Ribosome biogenesis [BR:
ehl03009
]
EHLA_3012
Enzymes [BR:
ehl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EHLA_3012
Messenger RNA biogenesis [BR:
ehl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EHLA_3012
Ribosome biogenesis [BR:
ehl03009
]
Prokaryotic type
rRNA helicases
EHLA_3012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
SOB73561
UniProt:
A0A285PVA7
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All DBs
Position
I:complement(3170024..3171610)
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AA seq
528 aa
AA seq
DB search
METVKFTELDIRPEILKAVANMGFEAMSPIQAKAIPVELSGRDVIGQAQTGTGKTAAFGI
PILQKIDPKLKKPQAIVLCPTRELAIQVADEIRKLAKYMASVKILPIYGGQEISKQIRSL
KSGVQIIIGTPGRMMDHMRRKTVKFDNIHTVVLDEADEMLDMGFREDIETILNGVPEERQ
TMLFSATMPKPIMELAKAYQTEPETIKVIRKELTVPNITQYYYEVRPKNKSEVLSRLLDI
YDPKLSVVFCNTKKGVDELVADLKGRGYFAEGLHGDMKQTMRDRVMHRFRSGKTDILVAT
DVAARGIDVDDVDAVFNYDLPQDEEYYVHRIGRTGRAGRTGMAFSFVVGREVYKLKDIRR
YCKAKIKAQPIPSINDVTETRVEKIFDRIDNYIEDQNLNKYISMVEDFVNEKDYTAMDVA
AAFLAEILGTADGRDAGNKEDFGDTGAEEGMVRLFINIGKKQGIRPGNILGAIAGESGIS
GNLVGTIDMYDKYTFVEVPREVASDVLEAMKNVKIKGKSVNVEPANRK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggagacagtaaaatttacagaacttgatataagaccggagattttaaaagcggttgcc
aatatgggatttgaggcgatgtccccaattcaggcaaaggcgattccggtagagctttcc
ggaagagacgtgatcggacaggcgcagacaggaacaggtaagacggcagcgtttggtatt
cctattttacagaagatcgatccgaagcttaaaaaaccacaggcaatcgttctttgtccg
acaagagagcttgcaattcaggttgcggatgagattcgtaaacttgcaaaatatatggca
tctgtaaagattcttccaatttacggaggacaggagatttccaaacagattcgttcgtta
aagtcaggtgtacagatcatcatcggaacaccgggacgtatgatggatcacatgagaaga
aaaacagtgaagtttgacaatatccatacggttgttttagatgaggcagatgagatgctt
gatatgggatttcgtgaagatatcgagacaatcttaaacggagtgcctgaggaaagacag
acgatgcttttctctgcgacaatgccaaagccgatcatggagcttgccaaagcttaccag
acagagccggagacaattaaagtgatcagaaaggaactgacagttccgaatatcacacag
tattattatgaagtacgtcctaagaataagagcgaggtattatcaagacttcttgatatt
tatgatccaaagctgtctgttgtattctgtaatacaaagaagggcgtagatgaattagta
gctgaccttaaaggaagaggttactttgcagagggacttcatggagatatgaagcagacg
atgcgtgatcgtgttatgcaccgtttcagaagcggtaagacagatattcttgtagcgaca
gatgtagctgccagaggtattgacgtggatgatgtagatgcggtatttaactacgacctt
ccacaggatgaggaatattatgtacatcgtatcggaagaaccggtcgtgcgggaagaacc
ggtatggcattcagcttcgttgtaggaagagaagtttataagttaaaagatatccgccgt
tactgcaaggcaaagatcaaggcacagccaattccatcaatcaatgatgtaacagaaaca
agagtagagaagatttttgatcgtatcgacaactatatcgaagatcagaacttaaataaa
tacatttccatggtagaagatttcgtaaatgaaaaagactatacagcaatggatgtagca
gcagctttccttgcagagattcttggaactgcagatggaagggatgccggcaataaagaa
gacttcggtgatactggtgcagaagaaggaatggttcgtctctttatcaatatcggaaag
aaacagggaatccgtccaggaaatattttaggtgcgattgcaggagaatccggaatttca
ggtaatcttgtaggaacgattgatatgtatgacaagtatactttcgtagaagtacctaga
gaagttgcttctgatgtattagaagcaatgaaaaatgtaaagattaaaggtaaatccgtt
aacgtagaaccagcaaacagaaagtaa
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