Enterobacter hormaechei CAV1176: AB284_05515
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Entry
AB284_05515 CDS
T04593
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ehm
Enterobacter hormaechei CAV1176
Pathway
ehm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ehm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB284_05515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehm03019
]
AB284_05515
03016 Transfer RNA biogenesis [BR:
ehm03016
]
AB284_05515
Enzymes [BR:
ehm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AB284_05515
Messenger RNA biogenesis [BR:
ehm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AB284_05515
Transfer RNA biogenesis [BR:
ehm03016
]
Prokaryotic type
tRNA degradation factors
AB284_05515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
OB_RRP5_4th
aRib
KH_2
S1_RRP5
KH-I_KHDC4-BBP
DUF4172
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
ANS16119
UniProt:
A0A2J0Q135
LinkDB
All DBs
Position
944812..946950
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AA seq
712 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGKIPGGFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGSARVGYINDQYVLNPTQEELKESKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQIVIQNINDLVKEAGKPRWDWQPEAVNE
ALNARVAALAESRLSDAYRITDKQERYAQVDVIKSEVTATLVAEDETLDANEIGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQIIDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPEADK
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISQFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKYAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQSQPAAAPEAPAAEQQGE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgatcgttcgtaaattccagtatggtcagcataccgtcacgctggaaacc
ggcatgatggcgcgtcaggctactgctgccgttatggtaagcatggatgacaccgctgta
ttcgttaccgtagttggccagaaaaaagctaaaccaggtcaggacttcttcccactgacc
gttaactaccaggagcgtacctacgctgccggtaaaatcccgggtggcttcttccgtcgt
gaaggccgtccaagcgaaggcgaaaccctgatcgcgcgtctgattgaccgcccggttcgt
ccgctgttcccggaaggcttcgtaaacgaagttcaggttattgcgaccgttgtttccgtt
aacccacaggttaacccggacatcgttgctatgatcggcgcatctgcggccctgtcactg
tctggtattccattcaatggcccaatcggttccgcgcgcgttggctacatcaacgaccag
tacgtactgaacccaactcaggaagagctgaaagagagtaagctggacctggttgttgcc
ggtactgaagccgcggttctgatggttgaatccgaagctgaactgctgagcgaagatcag
atgctgggcgctgtggtatttggccacgagcagcagcagatcgttatccagaacatcaac
gacctggtgaaagaagccggtaaaccacgttgggactggcagccagaagcggtgaacgag
gcgctgaacgcacgcgttgctgcactggcagaatctcgtctgagcgacgcataccgcatc
accgacaaacaggagcgctatgctcaggttgatgtgatcaaatctgaagtgaccgcgacc
ctggttgccgaagacgaaacgctggacgctaacgagattggcgaaatcctgcacgccatc
gagaaaaacgttgttcgtagccgcgtcctggcaggcgagccgcgtatcgatggccgtgaa
aaagacatgatccgtggtctggacgtgcgtactggcgtactgccacgtactcacggttct
gcgctgttcacccgtggtgaaacgcaggcgctggtaaccgcgaccctgggtaccgcacgt
gacgcacagatcatcgacgaactgatgggcgagcgtactgacagcttcctgttccactac
aacttccctccgtactctgtgggcgaaaccggtatggttggctcaccgaagcgtcgtgaa
attggtcacggtcgtctggcgaagcgcggcgtgctggcagtgatgccagaagcagacaaa
ttcccgtacaccgtacgtgtggtgtctgaaatcaccgaatccaacggttcctcttctatg
gcttccgtgtgtggtgcctctctggcgctgatggatgcaggcgtgccaattaaagccgcc
gttgcaggtatcgcaatgggtctggtgaaagagggcgacaactacgttgttctgtctgac
attctgggcgacgaagaccacctgggcgatatggacttcaaagtagcgggttcccgtgac
ggtatctctgccttgcagatggatatcaaaattgaaggtatcaccaaagagatcatgcag
gttgctctgaaccaggctaaaggtgcgcgtctgcacatcctgggcgtgatggaacaggcg
attaatgcgccgcgtggtgatatttctcagttcgctccacgtatccacaccatcaagatc
aatccagacaagatcaaagatgttatcggtaagggcggttctgttatccgtgcactgacc
gaagaaacgggcaccaccatcgaaatcgaagatgacggtactgtgaaaatcgcagcaacc
gacggcgagaaagcgaaatacgctatccgtcgtatcgaagagatcacggcagaaatcgaa
gtgggccgtatctacaatggtaaagtgacccgtatcgttgactttggcgcattcgttgcc
atcggtggcggtaaagaaggtctggtacacatctctcagatcgctgacaagcgcgttgag
aaagtgaccgattacctgcaaatgggtcaggaagtaccggtgaaagttctggaagttgac
cgccagggccgtatccgtctgagcattaaagaagcaaccgagcagtctcagcctgctgcg
gcgccggaagctccggctgctgaacagcaaggcgagtaa
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