Enterobacter hormaechei CAV1176: AB284_06145
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Entry
AB284_06145 CDS
T04593
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
ehm
Enterobacter hormaechei CAV1176
Pathway
ehm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ehm00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AB284_06145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ehm03021
]
AB284_06145
Transcription machinery [BR:
ehm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AB284_06145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_SUN2
Motif
Other DBs
NCBI-ProteinID:
ANS16238
UniProt:
A0A179PTW0
LinkDB
All DBs
Position
complement(1072152..1073996)
Genome browser
AA seq
614 aa
AA seq
DB search
MEQNPQSQLKLLVQRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP
DADDLLLAETSNNTDEDAEEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEID
IAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDPNAEEDMAPTA
THVGSELSQEEMDDDEDEDEEEEDDSSDDDNSIDPELAREKFAELRTQYEVTRDTIKAKG
RSHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVMMDRVRTQERIIMKLCVEQCKMPK
KNFITLFTGNETSETWFNAAIAMNKPWSEKLHDVKEDVQRGLQKLHQIEEETGLTIEQVK
DINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKF
EYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPT
PEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTES
LRAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLR
HPSRSEVLRSFLDD
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacccgcagtcacagctgaaacttcttgtccaacgcggtaaggagcaaggc
tatctgacctatgccgaggtcaatgaccatctgccggaagatatcgtcgattcagatcag
atcgaagatatcatccaaatgatcaatgacatgggcattcaggtgatggaagaagcaccg
gatgccgatgatctgttgctggctgaaacctccaacaacactgacgaagatgcggaagaa
gctgctgcacaggtcctgtccagcgtggaatctgaaatcgggcgtaccactgacccggtc
cgcatgtacatgcgcgaaatgggtaccgttgaactgttgacccgcgaaggcgaaattgac
atcgcaaaacgcatcgaagacgggatcaaccaggttcagtgctctgttgccgaatacccg
gaagcgattacctatctgctggagcagtacgatcgcgtcgaagcggaagaagcgcgtctg
tccgatctgatcactggctttgtcgacccgaacgctgaagaagatatggcgccaaccgcc
actcacgtcggttctgagctgtctcaggaagagatggatgacgacgaagacgaagatgaa
gaagaagaggacgacagcagcgacgatgacaacagcatcgaccctgaactggcgcgtgag
aagtttgccgagctgcgtacccagtacgaagtgacgcgtgacaccatcaaagcgaaaggc
cgcagccatgccgccgctcaggaagagatcctgaagctgtctgaagtgttcaaacagttc
cgcctggtgccaaaacagttcgactacctggtgaacagcatgcgcgtgatgatggatcgc
gtacgtacccaggaacgtatcatcatgaagctgtgcgttgaacagtgcaaaatgccgaag
aagaacttcattaccctcttcaccggcaatgaaaccagcgaaacctggttcaacgccgct
atcgcgatgaacaagccgtggtctgaaaagctgcacgacgtgaaagaagacgtacagcgc
ggcctgcaaaaactgcatcagattgaagaagagaccggcctgaccatcgagcaggtgaaa
gacatcaaccgtcgtatgtccatcggtgaagcgaaagcccgccgtgctaagaaagagatg
gttgaagcgaacttacgtctggttatctctatcgccaagaaatacaccaatcgtggcctg
caattcctggatctgattcaggaaggcaacatcggtctaatgaaagcggtagataagttt
gaataccgtcgtggttacaagttctccacctatgctacctggtggatccgtcaggcgatc
acccgctctatcgcagaccaggcgcgcaccatccgtattccggtgcatatgattgagacc
atcaacaaactcaaccgtatctctcgccagatgttgcaggagatgggccgcgagccgacg
ccggaagagctggctgaacgcatgttgatgccggaagacaagatccgtaaagtgctgaaa
atcgctaaagagccaatctccatggaaacgccaatcggtgatgatgaagattcgcatctg
ggtgatttcatcgaggataccaccctcgagctgccgctggactctgccaccaccgagagc
ctgcgtgccgctacgcacgacgtgctggctggcctgaccgcccgtgaagccaaagtgctg
cgtatgcgtttcggtatcgacatgaacaccgaccacacgctggaagaagtgggtaaacag
tttgacgttacccgcgaacgtatccgtcagatcgaagcgaaggcgctgcgtaagctgcgc
catccgagccgctctgaagtgctgcgtagcttcctggacgattaa
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