Enterobacter hormaechei CAV1176: AB284_13230
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Entry
AB284_13230 CDS
T04593
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ehm
Enterobacter hormaechei CAV1176
Brite
KEGG Orthology (KO) [BR:
ehm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ehm03016
]
AB284_13230
Enzymes [BR:
ehm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AB284_13230
Transfer RNA biogenesis [BR:
ehm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AB284_13230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
ODP
Rho_RNA_bind
Motif
Other DBs
NCBI-ProteinID:
ANS17552
UniProt:
A0A822WEP6
LinkDB
All DBs
Position
complement(2569124..2571058)
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDGQKSYFIPPPQMKKVMHGDRI
SAVIHTEKERESAEPEALIEPFLTRFVGKVHKKDDRLSVVPDHPLLKDAIPCRAARGVEH
DFVEGDWAVAEMRRHPLKGDRGFYAELTQYITFGDDHFVPWWVTLARHNLEKEAPEGVAT
EMQNEGLERRDLTALDFVTIDSASTEDMDDALYAEDTADGKLHLTVAIADPTAWIVEGSK
LDEMAKVRSFTNYLPGFNIPMLPRELSDDLCSLRAHEVRPVLACRMTIAADGTIEEDIEF
FAATIESKAKLAYDDVSDWLENTGSWKPESDNIAAQIRLLHRVCLSRSEWRQTHALVFKD
RPDYRFVLGEKGEVLNIVAEPRRIANRIVEEAMISANICAARVLRDKLGFGIYNVHTGFD
PANTEALAALLKTHDVHVDPEEVLTLQGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIIKGESVARPQDDTTLQMAERRRLNRM
AERDVGDWLYARFLNDKAGTDTRFPAEIIDISRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCGQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSIIARPVA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagacgccg
cgtgcagaaggggtcgtaaaagccacggaaaagggctttggctttcttgaagttgacggg
cagaagagctacttcattccgcctcctcagatgaagaaagtgatgcatggcgaccgcatt
tcggccgttattcataccgaaaaggaacgagagtctgccgagccggaagcactgatcgaa
cctttcctgacccgctttgtcgggaaagtgcataaaaaagacgatcgtctttctgtcgtg
ccggaccatcctctcctgaaagatgctattccgtgccgcgccgcgcgtggcgttgagcat
gattttgttgagggtgactgggcggttgctgagatgcgccgtcatcctttaaaaggcgat
cgcggtttttacgccgagcttactcaatacattaccttcggcgacgaccatttcgtccca
tggtgggtgacgctggcgcgccacaacctcgaaaaagaagcgcctgagggcgtggcgact
gaaatgcagaacgaaggtctggaacgtcgcgatctgacggcgctggactttgtcaccatt
gacagcgccagcaccgaggatatggacgatgcgttgtatgccgaagatacagccgatggc
aaactgcatctgaccgtcgccattgccgaccctaccgcatggattgtcgaaggcagcaag
ctggacgagatggccaaagtgcgctcgttcaccaactacctgccgggctttaacattccg
atgctgccgcgtgaactctccgacgatctttgctcgctgcgtgcgcatgaagtgcgtccg
gtgctggcctgtcggatgaccattgcggctgatggtaccattgaagaagatattgaattc
ttcgccgccaccatcgaatccaaagccaagctggcctatgacgacgtgtccgactggctg
gagaacacgggtagctggaaacctgagtccgacaacattgccgcacaaattcgtctgctg
caccgcgtctgcctgagccgcagcgaatggcgtcaaactcacgcgctggtcttcaaagat
cgtccggactaccgttttgtgctgggtgaaaaaggtgaagtgctgaatattgtcgctgag
ccgcgccgtattgccaaccgcatcgttgaagaagcgatgatatccgccaacatttgtgcc
gcccgcgtgctgcgcgacaaattaggctttggcatttacaacgtgcacaccgggtttgat
ccagcgaacaccgaagcgctggctgccctgctgaaaacccatgacgtacacgtcgatcct
gaggaagtgctgaccctgcaaggtttctgcaaactgcgccgcgagctggacgcgcagcct
tcagggttccttgacagccgtattcgccgcttccagtcctttgcggaaatcagcaccgag
ccaggcccgcacttcggccttggccttgaggcttacgcgacctggacctccccgatccgt
aagtacggcgatatggttaaccatcgtctgctgaaagcgatcatcaaaggggaatctgtt
gcccgcccacaggatgatacgacgttgcagatggcagaacgtcgccgtcttaaccgtatg
gcggagcgtgatgtcggcgactggttatacgcgcgcttcctgaatgataaggcagggact
gacacccgtttcccggctgaaatcattgacatcagccgcggcggtatgcgcgttcgtctg
gtggataatggcgccgttgcctttattcctgccccgttcctgcatgccgttcgcgacgaa
ctggtttgtggccaggaaaacgggaccgtgcaaattaaaggcgaaacggtttacaaggtc
actgacgtgattgatgtcaccatcgctgaagtgcgcatggaaacccgcagtattatcgcg
cgccctgtcgcctga
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