Eubacterium hominis: H9Q80_08570
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Entry
H9Q80_08570 CDS
T08599
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ehn
Eubacterium hominis
Pathway
ehn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ehn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H9Q80_08570 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ehn03021
]
H9Q80_08570 (rpoC)
03400 DNA repair and recombination proteins [BR:
ehn03400
]
H9Q80_08570 (rpoC)
Enzymes [BR:
ehn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H9Q80_08570 (rpoC)
Transcription machinery [BR:
ehn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H9Q80_08570 (rpoC)
DNA repair and recombination proteins [BR:
ehn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H9Q80_08570 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
PA_decarbox
DUF4241
Motif
Other DBs
NCBI-ProteinID:
QNM13977
UniProt:
A0A7G9GT45
LinkDB
All DBs
Position
1694330..1698205
Genome browser
AA seq
1291 aa
AA seq
DB search
MSVNNFASIQVSLASPDRIHEWSHGEVKKPETINYRSQKPERDGLFCERIFGPSKDWECY
CGKYKKVRYKGVVCDRCGVEITKSSVRRERMGHIELAAPVAHIWYLRGIPSRMALLLDVT
PKQLEEVVYFVSWIVTDPKDTKLEYKQILSEKEYRENMAIYGPGSFTAQTGAEAALTLLK
EVDLEAEYKNIQLQLETAQGEKRKKLIKRLDTVQAFRNSDNDPEWMVLTVIPVIPPDLRP
MLQLDGGRFATSDLNDLYRRVITRNNRLKKLLELGTPAIIVQNEKRMLQEAVDALIDNGR
RSKPITGAGGRALKSLSHSLKGKQGRFRQNLLGKRVDFSGRSVIAVGPDLKMYQCGIPRE
MAIQLFKPFVINEIVNREIASNPKTAEKLIDRQDPRIWDIVEDVIDGYPVLMNRAPTLHR
LGIQAFKPKLVEGRAMRLHPLVCTAFNADFDGDQMAVHVPLSEEARAEALIMMLGSNNIL
GPKDGKPIVTPGQDMVMGNFYLTMEETAEEFYAEAERYMSVDCPKSAALWTRYGDNEGHV
YGSLDEILMAYQTQQIHLHSRIAIPARNLKKTCFTKEQENMYLLTTVGKVIFNNMFPEDF
PFLNEVSEANFKATPEKFFIPMGSDVKEEIKKLPITSAFKKKDLGKIIGEVFKRYSTEKT
SEILDQIKDYGFKYSTVAGVTVSLSDIEVAPHKEDHVEYGKEKAEELKMLRKKGKLTMQE
WERHLNKLWADVKDDIAEELLGNLPRKNPINMMARSGARGNTSNFTQLAGMRGLMAKPSQ
SKSAKGEYVPSIIEVPIYSCFREGLNVSEFFISTHGVRKGLTDTALKTAESGYLTRRLVD
VAQDVIVKQEDCGTDKGYWVEAIIDRKTNSIIESFYDRLAGRYSKQEIRDPKTNELIIES
DEFITEAIAQKIVDAGVEGMYIRSAFTCKSIYGVCKKCYGRNMATGKDVEVGEAVGIMAA
QSIGEPGTQLTMRTFHTGGVASADGGDITQGLPRVEELFEARCPKGVAVLAQISGEITSV
EPLENGTGFEVVISNDKESIAHKVSLVQAIRPWMKVGAHVEAGDKITEGQVDPKELLKVA
GVRQVQNYILKEVKKVYASQGIEISDKHIEVMIRQMLRKVVVLEGNDTDLNPGVQISLTE
ITKINRNVLLSGKVPATFKPVLLGISKASVETDSFLSAASFQETTKVLTDAAIKGKKDFL
IGLKENVIIGKLIPAGTGCKADRETNKLIDIKAQELKEQREERNHRDEDDDFMNYVLGPE
KLTSEDIQKIMADEAALSIDDSSDLHIVPEN
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttaataattttgcctcaattcaggtaagtttagcttcaccagatcgtatccat
gaatggagtcatggagaagttaaaaaaccagaaacgatcaactaccgttctcagaaacca
gaacgtgatggtttattctgtgaaagaattttcggccctagcaaggactgggaatgttac
tgtggtaaatataaaaaagtacgctacaaaggtgttgtatgtgaccgttgtggggtagaa
atcacaaaatcaagcgttagacgtgagcgtatgggacacatcgaacttgctgctcctgtt
gcacacatctggtacttgcgtggtatccctagccgtatggcattgttacttgacgtaaca
ccaaaacagttagaagaagtagtatatttcgtatcctggatcgttacagatccaaaggat
acgaaactggaatacaaacagattctttcagaaaaagaataccgtgaaaacatggcaatt
tatggaccaggaagctttacagcacaaactggtgcagaagctgctttgacactgttgaaa
gaagtagatctggaagctgaatataaaaacattcagttacagttagaaactgcacaggga
gaaaaacgtaaaaaattaatcaaacgtttggatactgtacaggcattccgtaattcagac
aacgatccagaatggatggtattaacggtaattccagttattccacctgatttaagacca
atgctgcagctggatggtggacgttttgcgacaagtgatctaaatgacttataccgtcgt
gttatcactcgtaacaatcgtttgaaaaagctgttagaacttggtactcctgcaatcatc
gttcaaaacgaaaaacgtatgttacaggaagctgtcgatgccttaattgataatggtcgt
agaagtaaaccaatcacaggcgctggtggacgtgcattaaaatctctgtcacactcatta
aaaggtaaacagggacgtttccgtcagaacttgttaggtaaacgtgttgacttctcagga
cgttccgttatcgcggtaggaccagacttgaaaatgtatcagtgtggtatccctcgtgaa
atggctattcaattattcaaaccattcgttatcaacgaaattgtaaatagagaaattgct
agcaatccaaaaactgcagaaaaactaatcgatcgtcaggacccacgtatctgggatatt
gtggaagatgttatcgatggctatcctgtattgatgaaccgtgcacctacactgcaccgt
ttaggtattcaggcatttaaaccaaaactagtagaaggacgtgctatgcgtctgcaccct
ctggtatgtactgcgttcaacgccgatttcgatggtgaccagatggctgttcacgttcca
ttaagtgaagaagcacgtgccgaagcattaattatgatgttaggtagcaacaatatcctt
ggtcctaaggatggtaaaccaatcgttacccctggacaggatatggttatgggtaacttc
tatttgacaatggaagaaactgcagaagaattctatgccgaagcagaacgttacatgtca
gtagattgcccgaaatcagcagcattatggactcgttatggagataacgaaggacatgtg
tatggcagcctggatgaaattttaatggcttatcagacacagcaaatccatctgcactcc
agaattgcgattcctgcaagaaatttgaaaaaaacatgcttcacaaaagaacaggaaaac
atgtatcttttaacaacggttggtaaagtaatctttaacaatatgttcccagaagatttc
ccattcctgaatgaagtgagcgaagctaactttaaagcaactcctgaaaaattctttatt
ccaatgggaagtgatgtaaaagaagaaatcaaaaaacttccaatcacatccgcattcaag
aagaaagatttaggaaaaattatcggagaagtgtttaaacgctactcaacagaaaaaaca
agtgaaatcctagaccagatcaaggactatggatttaaatattccactgttgcaggtgtt
accgtatctctaagcgatatcgaggttgctcctcataaagaagatcatgtagaatatggt
aaggaaaaagccgaagaactgaaaatgctgcgtaagaaaggtaaacttacaatgcaagaa
tgggagcgtcacttaaataaactttgggcagatgtcaaagatgatatcgctgaagagcta
ttaggtaaccttccacgtaaaaacccaatcaatatgatggcccgttccggagcccgtggt
aatacttctaactttactcagcttgcaggtatgcgtggtctgatggcaaaaccatcacaa
tcaaaatccgcaaaaggtgaatatgttccaagtattatagaggttcctatctactcatgt
ttccgtgaaggtctgaatgtgtctgagttctttatttccacacatggtgtgcgtaaaggt
ctgaccgatacagccttaaagactgcagagtctggttatctgactcgtcgtctggttgac
gttgcacaggatgttatcgttaaacaggaagactgtggtacagataaaggatattgggta
gaagcaatcattgatcgtaagacaaactctattatcgaaagtttctatgatcgtctagct
ggacgttatagtaaacaagaaatcagagatccaaaaacaaatgaattgattattgaatca
gatgaattcatcacagaagcaatcgcacagaaaattgtagatgctggtgttgaaggtatg
tatatccgtagtgcattcacatgtaaatctatttacggtgtatgtaaaaaatgttacgga
cgtaatatggcaactggaaaagacgtagaagtaggagaagctgtaggtattatggctgcc
cagtctatcggtgaaccaggtacacagctgaccatgcgtacattccataccggtggtgtt
gcgagtgcagatggtggagatatcacacagggtcttcctcgtgtcgaagaacttttcgaa
gcacgttgtccaaaaggtgttgctgttttagcacagatttctggtgaaattacaagtgta
gaaccattagaaaatggtactggatttgaagttgtcatcagtaacgataaagaaagtatc
gctcataaggtttcattggtacaggcaattcgtccttggatgaaagtcggtgcacatgta
gaagccggtgataagattactgaaggtcaggtagatccaaaagaattattgaaggtagct
ggtgtacgtcaggtacaaaactacattctaaaagaagttaagaaggtttatgctagccag
ggtattgaaatcagcgataaacatatcgaagttatgattcgtcagatgttacgtaaagtt
gtagtattagagggcaacgatacagatctgaatccaggtgtacagatttctttaacagaa
attacaaaaatcaaccgtaatgtattattgtctggtaaagtaccagcaactttcaaacca
gtattattaggtatttctaaggcgtcagtagaaacagactccttcttatctgctgcatca
ttccaggaaaccacaaaagtactgacagatgctgctattaagggtaaaaaagacttctta
atcggattgaaagaaaacgttattattggtaaattgattccagctggaacaggatgtaaa
gctgatagagaaactaataaactgattgatataaaagctcaggaattaaaagaacaaaga
gaagaaagaaatcatcgtgatgaagatgatgactttatgaattatgttcttggtccagag
aagttgactagcgaagatattcagaaaatcatggcagatgaagcagcattgtctattgac
gacagctctgatttgcacattgtacctgaaaactaa
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integrated database retrieval system
