Eubacterium hominis: H9Q80_12885
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Entry
H9Q80_12885 CDS
T08599
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ehn
Eubacterium hominis
Brite
KEGG Orthology (KO) [BR:
ehn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ehn03009
]
H9Q80_12885 (rlmD)
Enzymes [BR:
ehn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
H9Q80_12885 (rlmD)
Ribosome biogenesis [BR:
ehn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
H9Q80_12885 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_15
MTS
Methyltransf_25
TRM5-TYW2_MTfase
Cons_hypoth95
PrmA
Methyltransf_4
Methyltransf_11
PCMT
Ubie_methyltran
RrnaAD
Methyltransf_32
Methyltransf_12
N6_N4_Mtase
TPMT
UPF0020
Methyltransf_18
Methyltr_RsmB-F
TehB
Methyltransf_23
Methyltrans_SAM
KH_DUF2096_C
DOT1
NodS
Motif
Other DBs
NCBI-ProteinID:
QNM11152
UniProt:
A0A7G9GK20
LinkDB
All DBs
Position
2592956..2594281
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AA seq
441 aa
AA seq
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MKKNDKIVGTCSGYTKEGLGVVKIDGFPLFVKGILQNETAEMVVTLVKKTYGYAKVLSIK
EPSKQRCELKCPVAKQCGGCQLQHMTYTEQLHFKKQKVQDVIDRIAKLDMKVEDVLGMEN
PWYYRNKCQIPVGVDQNKVVTGFYRIHSNTIIDTNACAIQSETINEVLSHMKELLQTYGN
ASVFRHLLIKHAFTTGEVMLVWIVREYPFSSMKEMAEDIVQRLPYIKSVIVNVNTRTDNV
ILGEKEYTLYGDSYITDAIHNLKFHISSKSFYQVNPVQTNVLYGKALELAQLSGKETVID
LYCGVGTISMFLAQKAKKVIGIEIVPQAIQDAKENAKMNNIDNIEFICSDAASYANKLSE
ENMRPDVIVVDPPRKGLDQITLNSIIKMQPERIVYVSCDPATMARDLGIIKESNYEIKLV
QPVDMFSQTNGVECVTLIERI
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaatgataaaattgttggaacatgcagtggctataccaaagaaggtctgggc
gttgtgaaaattgatggttttcctttatttgtaaagggaatcttacagaatgaaacagca
gaaatggtcgttacattagtgaaaaaaacatatggatatgcaaaagtcctgtctatcaaa
gaaccatcaaaacagcgatgtgaattaaaatgtcctgtcgcaaaacaatgtggaggatgt
cagctacagcatatgacttatacagaacagctgcactttaagaaacaaaaagtacaggat
gtcattgatcgtatcgcaaaactggatatgaaagttgaagatgtattagggatggaaaat
ccatggtactatcgtaataaatgccaaatacctgtaggtgtggatcaaaataaagttgtc
acaggcttttatcgtatccattccaataccatcattgatacaaacgcctgtgcgattcaa
agtgaaaccattaatgaagtattatcccatatgaaagaattacttcaaacatatggcaat
gcttctgtatttcgccatcttttgatcaaacatgcattcacaacaggcgaggtcatgctg
gtatggattgtgcgagaatatcctttctcatctatgaaagaaatggcagaagatatcgtt
caaaggcttccttatatcaaaagtgtaatcgtcaatgtaaacaccagaacggataatgtg
attcttggagaaaaagaatacaccctgtatggagattcttatatcacagatgccattcat
aacctaaaattccatatctccagcaaatcattttatcaggttaatcctgtgcagaccaat
gtgctatatggcaaagcattagaattagcgcagctgagcgggaaagaaacagttattgat
ttatattgtggtgtcggtacgatctctatgttcttagcgcaaaaagcgaaaaaggttatc
ggaattgaaatcgttccacaggccattcaagacgcaaaagaaaatgcgaaaatgaataac
attgataatattgaatttatctgtagtgatgctgccagctatgcaaataaactaagtgaa
gaaaatatgcgtcctgatgtcattgtcgtggatccgccaagaaaaggattggatcagata
acattaaacagtattataaaaatgcagccagaacgtattgtttatgtatcctgtgatcct
gccacaatggcacgtgatcttggcattatcaaggaaagcaattatgaaatcaagctggtt
cagccggtagatatgttctcacaaaccaatggtgtagaatgtgtgacgttgatagaaaga
atttaa
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