KEGG   Eubacterium hominis: H9Q80_15790
Entry
H9Q80_15790       CDS       T08599                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
ehn  Eubacterium hominis
Pathway
ehn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ehn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    H9Q80_15790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ehn03019]
    H9Q80_15790
Messenger RNA biogenesis [BR:ehn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     H9Q80_15790
SSDB
Motif
Pfam: RNase_J_C RNase_J_b_CASP Lactamase_B_2 Lactamase_B RMMBL ODP
Other DBs
NCBI-ProteinID: QNM11691
UniProt: A0A7G9GLK9
LinkDB
Position
3173328..3174986
AA seq 552 aa
MDKVRIFALGGLDEDGKNMYVVEVNEAIFIIEAGLKYPDTDQLGVEFIIPDFTYLIENKD
RIQGIFITHAHDDVVAALPYLLKQINIPVYTGPLTANIIHETLKKEGVKNAKIHRMKRVS
KQVIGGVKVRTFPMTHAFPDNFGLAIQTDQGYIVYTGEFIVDYDMLQEEFLCDLNELSDI
GKKGVLCLLCESQYADKSGHTAPKHRVTSLIEPIFEESRGRILISSYSQSLFRIIEIIEL
AKKFNRKIFFHDKDMRDMLKILEEMKYYRVPKEMQVTEKNFDDEMEDIVILLTGSGKNLF
RTMSNIANHEDKFVSFRTSDTIIVASPIVSGTENDANVMENEIYKEGGKIFTLDGKTVLS
MHPSSEDLKMMLYLFRPKYYIPVKGEYRHLYVNANLATKMGYGPDKILILDNGQVAQFEN
KVLTSVGERLELEDTLIDGKENWDVTGVVLKDREVLSTDGVMVVGVGVSFKTKEVINGPD
VQTRGLIYLKDAEYIIKEVGNIMERCIEAAVKEKRYDNLQVRAEARDKISKYLMKETGKR
PMVLPVILEINI
NT seq 1659 nt   +upstreamnt  +downstreamnt
atggataaagtacgcatttttgcgcttggcggacttgacgaagacggaaaaaatatgtac
gttgtagaagtcaatgaagctatatttattattgaagccggtttaaaatatccggataca
gaccagttaggagtggaatttatcattccggactttacgtatttaattgaaaataaagat
cgaattcagggtatctttattacacatgcacatgacgatgtcgttgcggcgttgccatat
cttttaaaacaaatcaacatccctgtctatacaggaccattaactgcgaacatcattcat
gaaacactgaaaaaagaaggtgtgaagaatgcgaagattcatcgcatgaaacgtgtcagc
aaacaggtaattggtggtgtcaaggtaagaacattcccaatgacacatgcatttcctgat
aattttggtctggctattcaaacagatcaggggtatatcgtgtatacaggtgaattcatc
gttgattacgatatgctgcaggaagaattcctgtgtgatttaaatgaattaagtgatatt
gggaaaaaaggtgtattatgtcttttatgtgaatcccagtatgcagataagagtggacat
acagcaccaaaacatcgtgtaacttctttgattgaaccaatctttgaagaaagcagagga
agaatattgatttccagttattcacagagtttattccgtattattgagattatcgagcta
gctaaaaaattcaatcgtaagattttcttccatgataaagatatgcgcgatatgttaaag
attttagaagaaatgaaatactatcgtgtaccaaaagaaatgcaggttacagaaaagaat
ttcgatgatgaaatggaagatatcgtgatcctgttgacaggaagtggtaaaaacttattc
cgtacgatgtcaaatatcgccaatcatgaagataaatttgtatcctttagaacaagtgat
accattattgtcgcaagtcctattgtcagtggtactgaaaatgatgccaatgtcatggaa
aatgaaatctataaagaaggcggaaaaatctttacactggatggaaaaacggttttatcc
atgcatccaagtagtgaggatttaaagatgatgctgtatttattccgtccaaaatactat
attccggtaaaaggtgaatatcgtcatttatatgttaatgcgaaccttgcgaccaagatg
ggatatggaccagataagattttaattctggacaatggacaggttgcacagtttgaaaac
aaagtgttgaccagtgttggtgaacgtctggaattggaagatacactgattgatggtaaa
gaaaactgggacgttaccggtgttgtattaaaagatcgtgaagtgttatctacggatggt
gtcatggtagttggtgtaggtgtcagctttaagacaaaagaagtcatcaatggaccagat
gtacaaacaagaggtttgatctatttaaaagatgcagaatatattatcaaagaagttggt
aatattatggaacgctgtattgaagctgctgtcaaagaaaaacgttatgacaatttgcag
gttcgtgcagaagcaagagataaaatcagtaaatatctgatgaaggaaacaggaaaacgt
ccaatggtgttgcctgtaattctagaaattaatatttaa

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