Eubacterium hominis: H9Q80_18695
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Entry
H9Q80_18695 CDS
T08599
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
ehn
Eubacterium hominis
Brite
KEGG Orthology (KO) [BR:
ehn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ehn03016
]
H9Q80_18695
Enzymes [BR:
ehn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
H9Q80_18695
Transfer RNA biogenesis [BR:
ehn03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
H9Q80_18695
Prokaryotic type
tRNA splicing ligases
H9Q80_18695
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RtcB
LIAS_N
WHD_MCM8
Motif
Other DBs
NCBI-ProteinID:
QNM12241
UniProt:
A0A7G9GN59
LinkDB
All DBs
Position
complement(3725738..3726943)
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AA seq
401 aa
AA seq
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MIEIKGSYTTAVVYTEELDDASISQIFQICNQKSMEGCHIAIMPDVHMGSSCCVGTTIAL
KDKVIPSLVGVDIGCGMEVVKLKEKHIELARLDKFIRTEIPSGCNIRNKIHKKAAKLNLR
NLYCFHAIDELRSEKSLGTLGGGNHFIEIDTDEDGCLYLVIHSGSRHLGVEVASYYQKLA
YDHLNGCDEESLKALKESFKKQGREQQYAAIAKTLKNTKKTDIPYLMSYLEGKYKDAYLH
DIKIIQEFADISRQAMAEDIMKYMKLHAVERFTTMHNYIDEQQVLRKGAIRAGKGEIVWI
PLNMRDGALLCKGKGNSAWNASAPHGAGRAMSRSEAKQSFTLSEYKKEMKGIFTSSVVKS
TIDECPMAYKPADMIISQIEESVEILKKVTPIYNFKAGEDE
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaattaaaggaagttatacaactgcggttgtatatacagaggaactggatgat
gccagtatttcacagatttttcagatctgtaatcaaaaaagtatggaaggctgtcatatc
gccattatgccagatgtacacatgggatcttcttgttgtgtaggtacaacaattgcttta
aaggataaagtgatacctagtcttgtaggtgtggatattggttgtggtatggaagttgtg
aagttgaaagaaaagcatatagagcttgccagactagataaattcatacgtactgagata
ccatcaggctgtaatattagaaacaagattcataaaaaagcagcaaagttaaatttaaga
aacctatattgttttcatgccatagatgaattaagatcagaaaaaagtttaggtacgctt
ggaggaggaaaccatttcattgaaattgatacagatgaagatggttgtttatatctggtc
attcattctggaagcaggcatttaggcgtggaagtcgcaagttattatcagaagctggca
tatgatcatttaaatggctgtgatgaagaaagtttaaaggctttaaaagaaagctttaag
aaacaaggcagggagcaacaatatgctgctatcgcaaaaacattgaagaatacaaagaaa
acagatattccttatctaatgtcttacttagaaggaaagtataaagatgcatatctgcat
gatatcaaaatcattcaggagtttgcggatatatcaagacaggcaatggctgaagatatc
atgaagtatatgaaactacatgctgtagaacgatttacgaccatgcataattatattgat
gaacagcaggtattaaggaaaggcgctattcgcgctggtaaaggtgaaatcgtatggatt
ccattgaatatgcgggatggcgcattattatgtaaaggaaaaggcaattctgcatggaat
gcctcagctcctcatggggctggtagagcaatgagcagaagtgaagcaaaacaaagcttt
acattatctgaatataaaaaagaaatgaaagggatttttacatcatctgtcgtaaaatca
acgattgatgagtgtcctatggcttataaacctgcggatatgatcatttctcagattgaa
gaaagcgtggaaatcttaaaaaaagtaacaccaatttataactttaaagcaggcgaggat
gaataa
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