Edwardsiella hoshinae: A9798_08730
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Entry
A9798_08730 CDS
T04508
Name
(GenBank) peptigoglycan-binding protein LysM
KO
K19236
L,D-transpeptidase YcfS
Organism
eho
Edwardsiella hoshinae
Pathway
eho01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
eho00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
A9798_08730
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
eho01002
]
A9798_08730
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
eho01011
]
A9798_08730
Peptidases and inhibitors [BR:
eho01002
]
Cysteine peptidases
Family C82
A9798_08730
Peptidoglycan biosynthesis and degradation proteins [BR:
eho01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
A9798_08730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
Motif
Other DBs
NCBI-ProteinID:
AOV97044
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All DBs
Position
complement(1986899..1987912)
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AA seq
337 aa
AA seq
DB search
MKRRALTAISLMLSLWMAAGSTAQAADYPLPAPGSRLIGENFTYTVPQDGKPLESTAARF
QIGLLGMMEANPGVDPFLPKAGSELIIPAQMLLPDAPREGIVINLAELRLFYYPPGGERV
EVYPIGIGQLGRNTPEMVTRVSQHIKDPTWTPTANIRRHYRQQGITLPAVMPAGPDNPMG
RYALRLAAQGGVYLIHGTNADFGIGMRVSSGCIRLRPDDIEALFRSVPANTRVQIVNQPV
KVAIEPDGKRYVEVHQPLSRTERDDPQTMPIALSQSQAAFVASPLTDRAAFAQAMQRRSG
MPVLVSYAASVTPAALSRSPSAAPISAAQPETAPAAR
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaagagacgcgcattaaccgcaatcagcctgatgttgtcgctatggatggcggcaggg
agcaccgcgcaagcggccgattatcccctgcctgcgccgggtagccggctgatcggtgag
aactttacctataccgttccccaagatggtaagccgctggagtcgactgccgcgcgcttt
cagattgggttgctgggaatgatggaggccaatcccggcgtcgatccttttctgcctaag
gcgggcagcgagttgatcattccggcgcaaatgctgctgccggacgcgccgcgcgaaggg
atcgtcatcaacctggccgagctgcgcctgttctactatccgccgggtggggagcgggtc
gaagtctatccgatcggcatcggtcagttggggcgtaacacgccggagatggtgacccgg
gtgtcacagcatatcaaggatccaacctggacgccgaccgccaatattcgccgtcactat
cgccaacagggcatcactctgccggcggtgatgccggccgggccggataacccgatgggg
cgttatgcgctgcgcctggcggcgcaaggcggggtctatctgatccatggcaccaatgcc
gattttggtattggcatgcgcgttagctccggttgcattcgcttacgacctgacgacatc
gaagcgttgttccgcagcgttccggccaacacccgagtgcagatagtcaatcagccggtg
aaggttgcgattgagcctgatggcaagcgttatgtcgaggtacatcaaccgttatcgcgc
accgagcgtgatgatccgcagaccatgccgatcgcgctcagccagtcgcaggctgctttc
gtcgccagccccttgacagatcgcgccgctttcgcgcaggcgatgcagcgccgctccggt
atgccagtgctggtgagctatgcggctagcgttaccccggcggcgctctcccgctctccg
tcggcggcaccgatcagcgcggcacagccagaaacagcgccagcagcgcgttaa
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