Edwardsiella hoshinae: A9798_12230
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Entry
A9798_12230 CDS
T04508
Name
(GenBank) transcriptional regulator LsrR
KO
K11531
lsr operon transcriptional repressor
Organism
eho
Edwardsiella hoshinae
Pathway
eho02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
eho00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A9798_12230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eho03000
]
A9798_12230
Transcription factors [BR:
eho03000
]
Prokaryotic type
Other transcription factors
Others
A9798_12230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sugar-bind
MarR_2
Sigma70_r4
HTH_Crp_2
HTH_24
HTH_37
DUF7343
HTH_23
HTH_IclR
MarR
wHTH-PRTase_assc
Crp
Motif
Other DBs
NCBI-ProteinID:
AOV98621
LinkDB
All DBs
Position
complement(2748663..2749619)
Genome browser
AA seq
318 aa
AA seq
DB search
MTNESGILEGGMCEEEQVARIAWFYYHDGLTQSEISERLGLTRLKVSRLLEKGHQSGIIR
VQINSRFAGCLEYEDALRQRFALQRVRVLPALPGAETRGRLGIGAAHMLMETLQPQQLLA
VGFGEATMNTLKRLSGFISARQIRLVTLSGGVGPYMTGIGQLDAACSVSIIPAPLRASSA
AIARTLHNENSVKDVMLTAQAADAAVVGIGAINQKEQATILRAGYITAGEQLLIGRQSAV
GDILGYFFDNEGKIIANMPIHDELIGLSLAALSTIPQVIGVAGGVDKAEAIMAAMKGGYI
NGLVTDQETAARILALAA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatgaaagcgggatactggaaggtgggatgtgcgaagaggagcaggtggcgcgc
atcgcttggttctattatcacgatggcttgacgcagagcgagatcagcgagcgtctgggg
ttaacacggttaaaggtctcccgtctgctggaaaaggggcatcaaagcggcatcattcgt
gtccagatcaactcccgcttcgccggttgtctcgagtatgaggatgcgttgcgccagcgt
ttcgcgctacaacgcgtgcgcgttttgcccgcattacctggcgcggagacgcgtgggcgt
ttaggtatcggggcggcgcatatgttgatggagacgctgcaaccgcaacaattgttagcg
gtggggtttggcgaagcgaccatgaataccttgaagcggttgagtggttttatttctgct
cgccagatccgcctcgtgacactttccggtggcgttggcccctacatgacggggatcggg
cagttggatgccgcctgtagcgtcagcatcattccggcgcccttgcgggcctcctctgcg
gcgatcgcgcggacgctgcataacgaaaacagtgtgaaagatgtcatgttgacagcgcaa
gcggctgatgccgcggtcgtcggcatcggcgccatcaatcagaaggaacaggcgacgatc
ctgcgtgccggttatatcactgccggagagcaactgctgattggccgccaatccgccgtg
ggcgatatcttaggctatttctttgataatgaaggaaagattattgccaatatgcccatt
catgatgagctgatcggattgagtctggcagcgctctcgaccatcccacaggtgatcggg
gtcgccggcggtgtcgataaagccgaggcgatcatggcggcaatgaaagggggatatatc
aatgggttggttacggatcaggagaccgccgcccgcatattggccttagcggcataa
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