Edwardsiella hoshinae: A9798_12985
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Entry
A9798_12985 CDS
T04508
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
eho
Edwardsiella hoshinae
Pathway
eho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A9798_12985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eho03400
]
A9798_12985
Enzymes [BR:
eho01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A9798_12985
DNA repair and recombination proteins [BR:
eho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A9798_12985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
Helicase_RecD
AAA_11
SH3_13
UvrD-helicase
AAA_22
SLFN-g3_helicase
AAA_16
nSTAND3
PhoH
AAA_28
UvrD_C
FtsK_SpoIIIE
CbiA
DEAD
MukB
TrwB_AAD_bind
T2SSE
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AOV97770
UniProt:
A0A376DJP0
LinkDB
All DBs
Position
complement(2927319..2929169)
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AA seq
616 aa
AA seq
DB search
MCDELLSSLAQQYSLRPLDVQFARLLAPQQPHLALAAALVSLELAAGHVCLPLAALSAAA
LHRRFPAQADAWSTLLADWDEARWQTYLLAQPCVSLGERATPLVVSHGSLYLQRLWQDEG
TVAAFFATACAAHDADNPQLAAVLARLFPRSERRSPDWQQVAAAVAVTRQVAVISGGPGT
GKTTTVARLLAALVALAADRPPRIQLAAPTGKAAARLSESLGQALARLALPPSQAAAMPQ
EALTLHRLLGARADSARLRYHRDNPLHLDVLVVDEASMVDLPMMARLIEALPPRARLILL
GDRDQLASVEAGAVLGELCRFAEYGFSAPRAAELSRLCAAPIPAGPAQPAHALRDAISLL
RHSYRFAADSGIGRLAQAVNQGERRAALACLAAESSDLRWCEMVQDDDYLALLACCLAGY
RPMLEGIRAGQEPAQILAAFARFRPLCALREGPFGLHGLNERIALTLQRAGLLQRAAGDK
AWYAGRPVMITRNDASQKLFNGDIGITLGDEQQGWQVWFITSDGQMRAVQPNRLPPHETA
WAMTVHKSQGSEFDHTVLVLPSQPSPVVTRELVYTAITRARCQLTVFATRAALERAIRTP
TERRSGLMARLLAAAQ
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgatgagctgctctcttcgttggcgcagcagtacagcctgcgccccttggatgtg
caatttgcccgtctactggcgccgcaacagccccatctggcactggcggcggcgttagtc
agcctggagctggcggcggggcacgtctgcctgccgttggcggcgttgagcgcggcggca
ttgcatcggcgcttccccgcgcaggccgatgcgtggtccaccttactcgctgattgggat
gaggcgcgctggcagacctatctgctagcgcaaccttgcgtcagcctcggtgagcgggcg
accccgctggtggtgagccacggcagtctgtatttacaacgtctttggcaggacgaagga
acggtcgcggcgtttttcgccacggcctgcgccgcgcatgacgcggataacccgcaactg
gccgcggtgttggcgcgcctgtttccgcgtagcgagcggcgctcgccggactggcaacag
gtggcggcggcggtggcggtgacgcgccaggtagcggtgatctccggcgggccgggcacc
gggaagaccactacggtggcacgtctgttggcggccttggtcgcgttggcggccgatcgt
ccgccgcgcattcagttggcggcgccgaccggcaaggcggcggcgcgcttgagcgagtcg
ttaggccaggcattggcacgtctggcattaccgccgtcacaagccgcggcgatgccgcag
gaggcgttgactctgcaccgcctgttgggcgcgcgggccgacagtgcgcgtttacggtat
caccgcgacaacccgctccatctggatgtcttggtcgtcgacgaggcgtcgatggtcgat
ctgccgatgatggcgcgcttgatcgaggcattgccgccgcgggcgcgtttgatcctgtta
ggcgatcgcgatcagttggcctctgtcgaggcgggggccgtgttgggtgagttgtgccgt
ttcgccgagtatggtttcagcgccccacgcgccgctgagttgagtcgcttgtgcgccgcg
ccgatccccgccggaccggcgcaaccagcgcatgccttgcgtgacgccatcagcttgttg
cgccatagctaccgcttcgccgccgactcggggatcggtcgtctggcgcaggcggttaat
cagggtgagcggcgcgcggcgttggcctgtctggcggcggaatccagcgatttgcgttgg
tgtgagatggtacaggatgacgactacctggcgttattggcttgctgtctggcgggctac
cggccgatgctggaggggatccgcgcgggacaggaaccggcccagatcctggcggcgttt
gcccgttttcgcccgctatgcgccctacgggaggggccgttcggcctgcatggcttgaac
gaacgcatcgccttgacgctgcaacgcgccggtctgttgcagcgcgctgcgggcgacaag
gcatggtatgccgggcgtccggtgatgatcacccgtaacgacgccagtcagaaactgttc
aacggcgatatcggcatcaccttaggtgacgagcagcagggctggcaggtgtggtttatc
acgagcgatggccagatgcgagcagtgcagcctaaccgtctgccgccgcatgagacggcc
tgggcgatgacggtgcataagtcgcagggctcggaattcgaccataccgtgttggtgttg
ccaagccaaccctcgccagtggtgacgcgagaactggtgtataccgccatcacccgcgcg
cgctgccaactgacggtattcgccacccgggcggcgttggagcgtgccatccgcacgccg
acggagcgccgcagcggactgatggcccgtttgctggcggcggcgcagtga
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