Edwardsiella hoshinae: A9798_14640
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Entry
A9798_14640 CDS
T04508
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
eho
Edwardsiella hoshinae
Brite
KEGG Orthology (KO) [BR:
eho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eho03016
]
A9798_14640
Enzymes [BR:
eho01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
A9798_14640
Transfer RNA biogenesis [BR:
eho03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A9798_14640
Prokaryotic type
A9798_14640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AOV98067
UniProt:
A0A376DLK3
LinkDB
All DBs
Position
complement(3290824..3291786)
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AA seq
320 aa
AA seq
DB search
MSRPRRRGRDINAVLLLDKGPGMSSNDVLQKVKRIYNANKAGHTGALDPLATGMLPICLG
EATKFSQFLLDADKRYRVVARLGQRTDTSDADGQVVSERPVTFSEAQLAQALEGFRGAGR
QVPSMYSALKYQGRPLYEYARQGIAVPREARDITVYALRFIRWEGDELELEIHCSKGTYI
RTIIDDLGEVLGCGAHVIVLRRLQVSGYPSERMVTLAQLQALLVQAEQQGIAPRVLLDPL
LLPMDTAAAHLPEVNLSELVAGYVQLGQAVQTPGLPSQGMVRITVGESRRFIGVGEVDDQ
GRLAPRRMVVASRLSEDDPR
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgaccccgtcgtcgcggccgtgatatcaatgccgtcctgctgttggataaaggg
ccggggatgtcgtccaacgatgtgctgcaaaaggtgaagcgcatctacaacgctaataag
gccgggcataccggagcgttggatccgttggctaccggcatgctgccgatctgcctggga
gaggcgaccaaattttcccagttcctgctggatgcagacaagcgttaccgggtggttgcc
cgcttggggcagcgtaccgatacctctgacgctgatggtcaggtggtgagcgagcgtcct
gtgacttttagcgaggcgcagttggcgcaggcgctggaagggttccgtggtgcgggtcgc
caggtgccttcgatgtactcggccctcaagtaccagggacgcccgttgtatgaatacgcc
cgtcaagggatcgccgtgccacgtgaggcgcgcgacatcaccgtgtatgcgttgcgtttc
atccgctgggaaggggatgagttggagctggagatccactgctctaaggggacctacatt
cgcaccatcattgatgatttgggtgaagtgctgggctgcggcgcgcacgtcatcgtgctg
cgtcgcctccaagtctccggctatccgagcgagcgcatggtaacgttggcacagttgcaa
gcgttgctggtgcaggccgagcagcaggggatcgcgccacgcgtcttactcgatccgttg
ttgctgccgatggatactgccgccgcgcatctgccagaggtgaacctgtccgagctggtc
gcaggctatgtacaactgggccaagccgttcagacgccgggtctgccgtcgcaggggatg
gtacgtatcaccgtcggtgagtcgcggcgttttatcggtgtcggcgaggtagacgatcag
gggcgcttggctccgcgtcggatggtggtggcgtcgcgactctccgaggatgatccgcgt
tga
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