Enterococcus hirae: EHR_03905
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Entry
EHR_03905 CDS
T02160
Name
(GenBank) DEAD-box ATP dependent DNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ehr
Enterococcus hirae
Pathway
ehr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ehr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EHR_03905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehr03019
]
EHR_03905
03009 Ribosome biogenesis [BR:
ehr03009
]
EHR_03905
Enzymes [BR:
ehr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EHR_03905
Messenger RNA biogenesis [BR:
ehr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EHR_03905
Ribosome biogenesis [BR:
ehr03009
]
Prokaryotic type
rRNA helicases
EHR_03905
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DeaD_dimer
AAA_22
HTH_22
Motif
Other DBs
NCBI-ProteinID:
AFM69751
UniProt:
I6T541
LinkDB
All DBs
Position
complement(737033..738544)
Genome browser
AA seq
503 aa
AA seq
DB search
MKFKELELSPELLKSVERAGFEEATPIQSETIPLALSGKDVIGQAQTGTGKTAAFGLPML
EKIDTNRHELQGLVIAPTRELAIQTQEELYRLGRDKRVRVQAVYGGADIGRQIRGLKDRP
HIVVGTPGRMLDHINRHTLKLGTVETLVLDEADEMLNMGFLEDIENIISKVPEERQTLLF
SATMPPAIKNIGVKFMKSPTHVKIKAKEMTADLIDQYYVRAKEYEKFDIMTRLFDVQTPE
LTIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVLRSFKNGHLDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSVTFVTPNEMSYLHVIENLTKK
RMATLRPPTEKEAFKGQLGAAVEQIEAKLEENGLDKYLQTADKLLEEYSAQDLVALLLKT
TAKDPSDAIPVKITPERPLPMQKKGYNKNGKRGGGNNRNRRDNNNYRGNKSKGGYSKNNN
HQKDGGKRQNDKKRGFVIRTNND
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttaaagaattagaattatcaccagaattattgaaatcagtagagcgtgctggt
tttgaagaagcaacaccgatccagtcagaaacaatccctttagcattgtctggaaaagat
gtgattggacaagcacaaacagggactggtaagacggctgcttttggtttgccgatgtta
gaaaaaatcgacactaatcgccacgaattgcaagggttagtcattgcaccgacacgtgaa
ttagcgatccaaacacaagaagagctttatcgtcttggtcgtgataaaagagtacgtgta
caagctgtttacggaggcgctgatatcggtcgccaaatccgtggattgaaagatcgtcca
catattgtcgtaggaacacctggacgtatgctggatcacatcaaccgccacacattgaaa
ttaggaacagtggaaacattagttctagatgaagcagatgaaatgttgaacatgggcttt
ttggaagatattgaaaatattatttcaaaagtacctgaagaacgccaaacattattattc
tcagcaacaatgccacctgcaatcaaaaatatcggcgtgaaattcatgaaatcaccaaca
cacgtgaagatcaaagcgaaagaaatgacagctgacttaatcgatcaatattatgttcga
gcaaaagaatacgaaaaattcgatatcatgacacgtttgttcgatgtccaaacaccagaa
cttacgattgtttttggtcgtacaaaacgacgtgttgatgaattggcacgtggattagaa
gctcgcggttatcgtgcagaaggaatccatggggacctttcacaacaaaaacgaatgagt
gttttacgttcatttaaaaatggtcatttagatattttagttgctacggatgtagctgca
cgtggtttggatatttcaggcgtgactcacgtctacaactatgacattccacaagatcca
gaaagttatgttcaccgtatcggacgtacaggtcgtgcgggtaaaggcgggatgtcagtg
acattcgttacgccaaacgaaatgagctacctacatgttattgagaacttaacgaaaaaa
cggatggctactctacgtccgccaactgaaaaagaagcattcaagggacaactaggtgct
gcagtggaacaaattgaagctaagcttgaagaaaacggcttagacaagtatttgcaaaca
gcagataaattgcttgaagagtattctgcacaagatttagtagctttgttactaaaaacg
actgcaaaggatccttctgatgcaataccagttaaaatcactccagaacgtccattgcca
atgcagaaaaaaggctataataaaaatggcaaacgtggcggcggaaataaccgtaatcga
cgcgataataacaactaccgtggcaacaaatcaaaaggtggctacagtaaaaataataac
catcaaaaagatggcggtaagcgtcaaaacgataaaaaacgtggatttgtgatccgtaca
aataacgattga
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