Enterococcus hirae: EHR_05195
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Entry
EHR_05195 CDS
T02160
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ehr
Enterococcus hirae
Pathway
ehr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ehr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EHR_05195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ehr03021
]
EHR_05195
03400 DNA repair and recombination proteins [BR:
ehr03400
]
EHR_05195
Enzymes [BR:
ehr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EHR_05195
Transcription machinery [BR:
ehr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EHR_05195
DNA repair and recombination proteins [BR:
ehr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EHR_05195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AFM69995
UniProt:
I6S026
LinkDB
All DBs
Position
994283..997936
Genome browser
AA seq
1217 aa
AA seq
DB search
MIDVNKFESMQIGLASPEKIRSWSYGEVKKPETINYRTLKPEREGLFCERIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTRSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEIIYFASYVVIEPGNTNLEKKQLLTEREYREKREQYGQEFQAAMGAEAIKQLLD
SVDLDAEAAELKEELKSAQGQKRTRAIRRLDILEAFRASGNEPSWMVMDVIPVIPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPGIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPFLKMYQCGLPKE
MAIELFKPFVMRELVQRELASNIKNAKRKIERQEDEVWDVLEDVIKEHPVLLNRAPTLHR
LGIQAFEPVLVQGRAIRLHPLVCEAYNADFDGDQMAVHVPLNEEAQAEARMLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTMEEEGREGEGMVFRDQNEAVIAWRNGYVHLHSRIGVN
PNSLGEKPFTDWQKERTMITTVGKIIFNEIMPPEFPYLNEPTDFNLTVQTPDKYFVEAGT
DIPAHIKEQELVLPFKKKNLGNIIAEVFKRFKVTETSKMLDRMKDLGYKHSTHAGITVGI
ADISVLNEKQGIIENAHKQVETITKQFRRGLITDDERYERVIAVWNAAKDSIQQKLMEGL
EAKNPIFMMSDSGARGNISNFTQLAGMRGLMAAPNGRIMELPIISNFREGLSVLEMFIST
HGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREEDCGTDRGLEIQAIREGNEIIESLE
DRLIGRYTRKEVRDPETNELIIAGNQLISEDIAKQIVDAGVETVTIRSVFTCNTKHGVCK
HCYGRNLATGSDVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVQEIF
EARNPKGQAVITEVTGDVIDISEDASTRTKEVTIKGKTDTRTYTVPYTARMKVAEGDMIH
RGAPLTEGSIDPKQLLQVRDVLSVENYLLREVQRVYRMQGVEIGDKHIEVMVRQMLRKVR
VMDPGDTDILPGTLMDIADFKDQNYNTLVAGGVPATSRPVLLGITKASLETNSFLSAASF
QETTRVLTDAAIRGKKDPLLGLKENVIIGKIIPAGTGMARYRNMEPKEVGVASENVYSIS
DIEAQMAAEDAMNEQTK
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgatgtaaataaattcgaaagtatgcaaataggtttggcttctcccgaaaaaatc
agaagctggtcttatggtgaagtaaaaaaacctgagacgattaactatcgtaccttaaaa
cctgaacgcgaagggttgttctgtgagcggatttttggtcctacgaaagactgggaatgt
gcctgcggaaaatacaaacgtatccgttataaaggaatcgtttgtgaccgatgcggtgtt
gaagtgacacgttcaaaagttcgtcgtgaacgtatgggtcacattgaattagcagcacct
gtttcacatatctggtactttaaaggaattccttctcgtatgggacttgttttagacatg
agtcctcgtgccttagaagaaatcatttattttgcttcatatgtggttatcgaaccagga
aacaccaacttagagaaaaaacaattgttgacagaacgtgaataccgcgaaaaacgtgaa
caatatggacaagaattccaagcagcaatgggtgcagaagcaatcaaacaattactagac
agtgttgatttagatgctgaagcagctgaattgaaagaagaattgaaatctgcccaaggg
caaaaacggactcgtgcgatccgccgtttggacattttagaagctttccgtgcttcagga
aatgaaccaagttggatggttatggacgttattccagttattccaccagatttacgacca
atggtgcaattagaaggtggacgttttgcaacaagtgatttgaatgatctttaccgtcga
gtaatcaaccgtaataaccgtttgaaacgcttgttagatttgaatgctccaggaatcatc
gtccaaaacgaaaaacggatgttacaagaagctgttgatgcgttgatcgataatggtcgt
cgtggccgtccagttactggaccaggtaaccgtccattgaaatctctttctcacatgttg
aaagggaaacaaggtcgtttccgtcaaaacttacttggtaaacgtgttgactattcagga
cgttccgttatcgttgtaggacctttcttgaaaatgtatcaatgtggattgccaaaagaa
atggcgatcgaactatttaaaccattcgtgatgcgtgaattggttcaacgtgaactagct
tctaacatcaaaaatgcgaaacgtaaaatcgaacgtcaagaagacgaagtttgggatgtc
ttggaagacgtaatcaaagaacacccagtattacttaaccgggcacctacgctacacaga
cttggtatccaagcatttgaacctgttttagtgcaaggccgtgcgattcgtttgcaccca
cttgtatgtgaagcttataatgccgactttgatggagaccaaatggccgttcacgtacca
ttgaacgaagaagcacaagcggaagcacgtatgttgatgttagctgctcaaaacatcttg
aatccaaaagacggtaaaccagttgtaacaccttcccaagatatggttttaggtaactac
tacctaacaatggaagaagaaggtcgtgaaggcgaaggaatggtcttccgtgaccaaaac
gaagctgtgatcgcatggcgtaacggctacgttcatttacactcacgtatcggtgtgaac
cctaattcattaggtgaaaaaccatttactgactggcaaaaagaacgtacgatgattaca
actgttggtaagatcatctttaatgagatcatgcctccagagttcccttacttgaatgaa
ccaacagacttcaacttaacggtacaaacaccggataaatattttgttgaagcaggtaca
gatattcctgcgcatatcaaagagcaagaattagtcttaccattcaagaagaaaaatcta
ggaaatatcattgcggaagtcttcaaacgtttcaaagtaactgaaacttctaagatgctt
gaccgaatgaaagacttagggtataaacattctacacatgctggtatcacagtaggtatc
gcagatatcagtgtactgaatgaaaaacaaggaatcattgaaaatgcccataaacaagtt
gaaacaattacaaaacaattccgtcgtggattgattactgatgacgaacgttatgaacga
gtaatcgctgtttggaatgctgctaaagatagcatccaacaaaaactgatggaagggtta
gaagcgaaaaacccaatcttcatgatgtctgactctggggcccgtggtaacatctccaac
tttactcagcttgctggtatgcgtggactgatggctgctccgaatggtcgaatcatggaa
ttaccgatcatctcaaacttccgtgaaggactttctgtcttagaaatgtttatctctact
cacggggctcgtaaagggatgaccgatactgccttgaagacagccgattcaggttacttg
actcgtcgtttagttgacgttgcccaagacgttattattcgtgaagaagattgcggaaca
gaccgcggtcttgaaatccaagcgattcgtgaaggaaacgaaatcattgaatcattagaa
gatcgtttgatcggtcgttacacacgtaaagaagtacgtgatccagaaacgaacgaattg
atcatcgctggtaaccaattgatttcagaagatattgcaaaacaaatcgtggatgcaggt
gtggaaactgtcacaatccgttctgtcttcacatgtaacacaaaacatggtgtctgcaaa
cactgttatggacgtaacttggcaactggatctgacgttgaagttggtgaagcagttggt
acgatcgccgctcaatcaatcggagaaccaggtactcagttgacaatgcgtaccttccat
accggtggggtagccggagacgatatcactcaaggtcttcctcgtgtccaagaaattttt
gaagcacgtaatcctaaagggcaagcagtgatcaccgaagtaactggtgacgtcatcgat
atctcagaagatgcttcaactcgtacaaaagaagtaacaatcaaagggaaaaccgacaca
cgtacgtatactgttccttatacagcacgtatgaaagtcgctgaaggcgatatgatccac
cgtggtgcaccattaacggaaggttcaatcgatcctaaacaattgttacaagttcgtgat
gtattatcagttgaaaactacttgctgcgcgaagtacaacgtgtataccgtatgcaaggg
gtagaaatcggcgataaacatatcgaagtaatggttcgacaaatgttacgtaaagtccgt
gtaatggatccaggggatactgatatcttaccaggtacattgatggatattgctgacttc
aaagaccaaaactacaatacattggtagctggaggcgtacctgcaacatctcgcccagtc
ctactaggtattacaaaagcatcattagaaacaaacagcttcttatctgctgcatccttc
caagaaacaactcgtgtcttgactgatgctgcgatccgaggtaaaaaagatccacttctt
ggtttgaaagaaaatgttatcatcggtaaaatcatcccagctggtactggtatggctcgt
taccgtaacatggaaccaaaagaagtcggtgttgcaagtgaaaatgtttatagtatttca
gacatcgaagcacaaatggctgcagaagatgcaatgaatgaacaaacaaaataa
DBGET
integrated database retrieval system
