Enterococcus hirae: EHR_06800
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Entry
EHR_06800 CDS
T02160
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ehr
Enterococcus hirae
Brite
KEGG Orthology (KO) [BR:
ehr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ehr03400
]
EHR_06800
DNA repair and recombination proteins [BR:
ehr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EHR_06800
Archaeal homologous recombinant proteins
EHR_06800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
AAA_29
ABC_tran
AAA_21
SMC_N
WSN
AAA_25
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
AFM70296
UniProt:
I6T6F0
LinkDB
All DBs
Position
1347785..1350919
Genome browser
AA seq
1044 aa
AA seq
DB search
MKPKKLRLKNFGPFIDETIDFAKLTEAPLFLITGKTGAGKTTLFDGMTYALFGETSGRIR
TGKEMRSLFATPEEETCVFFSFEHQRLNYEIERKPEQLLAKRKGEGNRKQAAKVSLTIFD
EAGKEMRQYTKRSEVDQLIKELMNLDAKQFSQIVLLPQGEFRNFLISSSSEKEIVLRNLF
GTQFFQQLNEQLKEKAKEHQKNLDHLEQELSLLQKRFIPLDTGTVPETLSFDALFTYWQA
EQTTLQERLLQEKNKLVHLQEQQKKLEDTYYHSQTLQTRQEEKQKLEQKHAELIQQESEI
NEIKQWITHYEFAERLVDTLTRSQEYQKEQAELIDKEQTCSETFVQQEQAYARWHKEEPE
RKNAQQEMEHAANRLQVMKSLIPIAEEWQKKQNESEELQKAKKKAEEKEQKILQEQVQLK
EEEQRLAELLLDQDRLHSDQLCYEQLRHEQEKYQTILTENHQNTEQLKMNQTKLSELITK
LQAQQVMLSKQNNQVDLLKSQWASQQIAKLQLLLLPGQPCPVCGSTEHPKQQNEHVLPKQ
EEFVQLEANLAEAETNLEQINQEIGRSEAEKAQIEQKIADLENFGTEKQVEIQKSKERLQ
HLIQQSFKFAIADDPLVSLEKIQHDLDSRAEVITQAKIATQTLTERLSLIEDQRKKITEQ
ISQNKEELQQVQGELVTLTKQLEGQNTQTLIEDVNQLEENVAMKAQWLAEEKTKELHFSQ
EISLLKAQMANIHEQQAKIENKIQRIQEQISAKIKEQAYFKEADEVLAFAKQTVEYQEKS
QLVNTYEKERLIVEDRLSQLNHVALAETLPDLEQLEQQLDELKAAVQTQQEHCYHLQEQE
QQNQQIIEEFSSIYQASQEQLDELIQLQQLSQTMNGENPRKTSLERYVLQVYLQEVLQVA
NVRLQRLTKNRYQFELADEVGSYRGKTGLEINIYDDEAGLTRGAHTLSGGESFIAALSLA
LALAEVIQTQAGGVLIEALFIDEGFGSLDEEALEMAIEALETIESEGRMIGIISHVRELK
ERVVQQIRIETEGSGQSKVRYHLG
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccaagaaattacgactaaaaaattttggtccttttattgacgagacaattgat
tttgcgaaattgaccgaagcaccactatttttgattactggaaaaacaggtgcaggaaaa
acgactctttttgatggaatgacttatgcattgtttggtgaaacttctggcagaatcagg
actggtaaagaaatgcggtctctttttgctacgcctgaagaagaaacgtgtgtctttttt
tcatttgagcatcagcggctgaattatgagattgaacgtaagccagaacaactcttggcc
aaacgtaaaggtgaaggcaatcgaaagcaagcagcaaaagtttctttgacgatctttgat
gaagcgggcaaagaaatgcgccaatacacgaaacgtagtgaagtggatcaattaatcaaa
gaattaatgaatctggatgcgaaacagttttctcagatcgttttactacctcaaggagaa
tttcgtaattttttaatttcatcaagtagtgagaaagaaattgtcttacgtaatttgttt
ggcacgcaatttttccaacaacttaatgaacaattgaaagaaaaagccaaagaacatcaa
aaaaatttagatcatcttgagcaagaattgagtttgctgcaaaaacggtttatccctttg
gacacaggaacggttcctgaaaccttaagttttgatgcgttattcacttattggcaggca
gagcaaacaacattacaagaaagacttctccaagaaaaaaataaactggttcatttacaa
gaacaacaaaagaaattagaagatacctattatcattcgcaaacattgcaaacacgtcag
gaagaaaagcaaaaattagagcaaaaacatgcagaattgatccagcaagaaagtgaaatc
aatgaaataaaacaatggatcactcattatgaatttgctgaacgactggtcgatacgttg
acacgaagtcaagaataccagaaagaacaagcagaactgattgataaagaacagacttgt
tctgaaacattcgtgcaacaagaacaagcgtatgcacggtggcataaagaggaacctgaa
agaaaaaatgcccaacaagaaatggaacatgcagcgaatcgattacaagtcatgaagtca
ttgatcccaattgcggaagaatggcaaaaaaagcaaaatgaaagtgaagagttacaaaag
gctaagaaaaaagcagaagaaaaagaacaaaaaattcttcaagaacaagtccagttaaaa
gaagaagaacaaagactagcagaactgctgcttgaccaagatcgcttgcacagtgatcaa
ttgtgttacgaacaacttcggcatgagcaagaaaagtaccaaactatccttacagaaaat
caccagaatacagaacagttaaagatgaatcaaaccaagttgtccgaactgatcacaaaa
ctccaagctcaacaagtaatgttaagcaaacaaaataatcaagttgatcttttaaagagt
caatgggcaagccaacaaattgcgaagttacaattgctattattaccggggcaaccttgt
ccagtttgtgggtcaacggagcatcctaaacaacaaaatgagcatgtattgcccaaacaa
gaagagtttgtccaactggaagcaaacttagcagaggcagaaacaaaccttgaacaaatc
aatcaagaaatagggcgtagtgaagcagaaaaagcacaaatagaacaaaaaatagctgac
ttggaaaacttcggaacagaaaaacaagtagagatccaaaaaagcaaagaacgattacaa
catttgatccagcaatcgtttaaatttgccatagcagatgatcctcttgtatccttagaa
aaaatccagcatgatttggattcgcgtgcagaggtcatcacacaggcaaaaatcgctact
caaacactaactgaacgtttaagtcttatcgaagatcagcgaaagaagatcaccgaacaa
atcagccaaaacaaagaagagctccaacaagtacaaggggagcttgttaccttgacgaaa
cagttagaaggacaaaatactcagactttgattgaggatgtcaaccaattagaagaaaat
gttgcgatgaaagcccaatggttagcagaagaaaaaacaaaagaacttcatttttctcaa
gaaatcagtttgttaaaagcgcaaatggctaatattcatgaacaacaggcaaaaattgaa
aataaaattcagcgtatccaagagcaaatttcagcaaaaataaaagagcaagcttacttt
aaagaagcagatgaggtattggcatttgctaaacaaacagttgaataccaagagaagagt
caactggtcaacacatatgagaaagaacgattaatcgttgaagaccgcttaagccagttg
aaccatgttgctttagctgaaacacttcctgatttagaacaattggagcaacaactagat
gagctaaaagctgcggttcaaacacaacaggaacattgttatcacttgcaagagcaagaa
cagcagaatcagcaaatcatcgaagaattttcttcgatttatcaagcgagtcaagaacaa
ttagatgaattgatccaactacaacaattatcgcaaacgatgaatggggaaaaccctaga
aaaaccagcttggaaagatacgtactacaagtgtatttacaagaagtactacaagtggca
aatgtgcgattgcaacgtctgacgaaaaatcgttaccaatttgagcttgcagatgaagtg
ggaagttaccgtgggaaaacagggttggagatcaatatctatgatgatgaagcaggtctg
acacgtggggctcatacgctatctggtggcgaaagttttattgcagctttatccttagcg
ttggctttagctgaagtgatccagacacaagccggtggtgtgttgatcgaagcgttattc
attgatgaaggatttggatcgttagatgaagaagcacttgaaatggcgattgaagcatta
gaaacaattgaaagtgaaggtcgtatgatcgggatcatcagccatgtgagagaattaaaa
gaacgagtagtacaacaaatcagaatcgaaacagaaggtagcggacaaagtaaagtacgc
tatcatcttggataa
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integrated database retrieval system
