Enterococcus hirae: EHR_12550
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Entry
EHR_12550 CDS
T02160
Name
(GenBank) exonuclease RexA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ehr
Enterococcus hirae
Brite
KEGG Orthology (KO) [BR:
ehr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ehr03400
]
EHR_12550
Enzymes [BR:
ehr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EHR_12550
DNA repair and recombination proteins [BR:
ehr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
EHR_12550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
DEAD
PDDEXK_1
ResIII
AAA_12
AAA_30
DUF4358
AAA_22
NPHP3_N
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AFM71377
UniProt:
I6T0L7
LinkDB
All DBs
Position
complement(2443427..2447143)
Genome browser
AA seq
1238 aa
AA seq
DB search
MTKIPLRPENERFTDEQWQAIFDQGDNLLVSASAGSGKTTVLVRRVIEKLKMGFNIDELL
IVTFTEAAAKEMKERIQEALQEAVNSESDPARQQHFTKQLILLPSANISTLHAFCLTVIR
RFYYLIDIDPVFRMLTDETETILMKEDVWDELHEACYSEDREEFFQLTMNFSNDRSDDGL
TNLVFSLYEFARANPDPKRWLDQLVDNYRLDDGLAHSPLYQEQLRPLLLTDMAQSVQLYE
EMVGLAQEEGLEKMLEQVAGEKEQVQRIYDHLLQDQLPEAYTGLETLTFTTFKSSRKAEL
KERSAEVKNLRDQAKKIIQKIGKTYFPISPEQLTERTKKAAVLVEELTNVTKRFMDGFSQ
RKREKGVVDFNDLEHLALRILTTQTEESWLPSEASKLYRKQFKEVMVDEYQDINQLQEAI
LYWLRQPDPTNGNLFMVGDVKQSIYSFRLADPSLFIEKYEAFSTAEGGRRIILAENFRSR
KEVLSFTNLVFQQLMDPVVGQIAYDDAAQLRLGFPDFPEVDRFEPELLIYEKEEEPNSDL
PIDENLEDKTEGELFMTGLKIRELIDEKFLIYDKKMKQNRPVEYKDIVLLTPTKKNNLTI
LEIFKTLDIPLEMNDAQNYFQSTELRTMISLLQLIDNPYQDIPLAAVLRSPIVGLIEPEL
AQIRLADRTHTYYDAVLAYQTANQNELADKLRHFNDQLELWRELARRSSITDLLWEIYLQ
TGYLEYVAGLPAGAQRQANLYALADRAKAYEQSSFRGLYQFVRFIEKMQEKDKDLAEPVI
SSSDNAVRVMTIHASKGLEFPIVFLLDMTKQFNLQDLKKRYAFEEKLGAGIRYMDPDTRV
LYDTLPYQAIKSAKQNKLLSEEMRKLYVGLTRAEQKLFIIGSYKNKEDTLKNWSEASEQT
KLVLEPTTRLKGNSSLMSWIGLSLMRHPLMQNYFAEATILSELKNSDSQFAITWMNQQSL
LEKRQRLIAQENDAAENNDVDQTPLSPALKARLDYRYPFKESTQTTSYQSVSEIKRLFED
PDDTLDAKLVWESNETRGLNRQFRYTQDTLAEPRFLQKTQQVSAAAIGTATHYLLQLLPL
ETPTTESIQALLDELVKKRLVDQKVAKKIDFSAILWFFETELGKELIKQKAHVKREQPFS
MLLPAERVFEQYPNEEDELLIHGIVDGYIELPTTIQLYDFKTDFILDRDDETAIDAVIQK
YRGQLNLYQQALTESLEKPVTDVFLVLLSAKKIININK
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaattcctttgagaccagaaaacgaacgattcactgacgaacaatggcaagcc
atttttgatcagggagataacttgctggtatcagcttccgctggttctggaaaaaccaca
gtgcttgtccgtcgagtaatcgaaaaactaaaaatggggttcaatattgatgaacttttg
atcgtgacgtttacagaagcggcagcgaaagaaatgaaagaacggatccaagaagcttta
caagaagcagtcaatagtgaaagcgatccggcacgccaacaacatttcacgaaacagctg
attttattgccgagtgctaatatttctactttacatgctttttgtttaacggttatccgc
cgattctactacttgatcgatattgatccagtttttcgaatgttaacggatgagacagaa
acgatcttaatgaaagaagatgtttgggatgaattacacgaggcttgttatagtgaagat
cgggaagagtttttccaattaacaatgaatttttcaaatgatcgttcagatgatggattg
accaatctggttttctctctttatgaatttgcgcgagcgaatcctgatcccaaacgttgg
ttagatcaattagtggataactatcgtttagatgatggattagctcattcaccattgtac
caagaacaattgcgaccacttctacttacagatatggcacaaagtgtgcaactttatgaa
gaaatggttggattagcgcaagaagaaggtctggaaaaaatgttggaacaagttgcagga
gaaaaagaacaagtccaacgcatttatgatcacttattacaagatcaattgccggaagcc
tatacgggtttagaaacattgacttttactacttttaaaagcagtcgcaaagcagagctg
aaagaacgttcagccgaagttaaaaatttaagagatcaggcgaaaaaaatcattcagaaa
attggaaaaacttattttccgatttctcctgaacaattgaccgaacggacgaaaaaagct
gctgtcctagtggaagagttgacgaatgtcaccaaacgtttcatggatggctttagccaa
cgaaaaagagaaaagggagtagtagatttcaatgatttagaacatcttgccttgcgaatc
ttgacgactcaaacagaagagtcatggcttccaagtgaagcatcaaagctttatcgtaag
caattcaaagaagtaatggtcgatgaataccaagatatcaaccagttgcaagaagctatc
ctttattggcttagacagcctgatccgacaaacggtaatttattcatggttggggatgtc
aaacagtcgatttattcttttcgactagctgatcctagtttgtttattgaaaaatatgaa
gcattttcaacagctgagggtggaagacggatcattttggcagaaaactttcgttcccga
aaggaagtcctgtcatttaccaatctggtgttccaacaattgatggaccctgttgtggga
caaatcgcttatgatgatgctgcacaattacgattaggatttcctgatttccccgaagtc
gatcgctttgaaccagaactattgatttacgaaaaagaagaagagccaaacagcgacctt
ccaattgatgagaatctagaggacaaaacagaaggtgaactctttatgacgggcttaaaa
atccgcgaactgattgatgaaaaattcctgatctatgataaaaaaatgaaacagaatcgt
ccagtcgaatataaagatatcgtacttttgacacctacaaagaagaataatcttacgata
ttagagatctttaaaacattggatattcctttagaaatgaatgatgcccaaaattatttt
caatctacagagttgcgtacgatgatttctttgctacaattgattgataatccgtatcaa
gatattcccttggcagccgttttacgttcaccgatcgtaggactgattgaaccagaactg
gcacagatccgtttagctgatcgaacgcatacctattatgatgcggtgctggcttaccaa
acagcaaatcagaatgaattggctgataaattgcgccatttcaatgaccaactcgaattg
tggcgggaactggctcggcggtcttcaatcactgacttgctgtgggagatctatttacaa
accggttatttagaatatgtagcaggtttaccagccggtgcccaaagacaagcaaacctt
tatgccttagctgatcgtgcgaaagcgtatgaacaaagttcgtttagagggttgtatcaa
ttcgttcgcttcatcgaaaagatgcaggaaaaagacaaagatttagcggagccggtgatt
tcctccagcgataatgctgttcgggtcatgacaattcacgcaagtaaaggcttagaattt
cctattgtctttttattagatatgaccaaacaattcaatttgcaagatttaaaaaagcga
tatgcttttgaagaaaaactaggtgcggggattcgttatatggaccctgatactcgggtg
ttgtatgataccttgccttatcaagcaatcaaatcagccaaacaaaataagttattgtca
gaggagatgcgtaaactctacgttggtttgacccgtgcggaacaaaaattatttattatc
ggctcgtataaaaataaagaagataccttgaagaattggtcagaagcttctgaacaaacc
aaattagtcttagagccaacgactcgattaaaagggaatagcagcttgatgagctggatc
ggtcttagtttgatgcgtcatccattgatgcaaaactattttgccgaagcaaccattctt
tcagaattaaaaaactctgatagccaatttgccattacttggatgaatcaacaatctctg
cttgaaaaaaggcaacgtttaatagcgcaagaaaacgatgctgctgaaaataatgacgtg
gatcaaacaccactatcacctgctttgaaagcacgactcgattatcgttaccctttcaaa
gagtcgacacaaaccacgagttatcaatcggtttctgaaattaaacgtttgtttgaagat
ccagatgatacgcttgatgctaaacttgtctgggaaagtaatgaaacaagagggttaaac
cgccaattccgttatacgcaagatacattggctgaaccacgtttcttacaaaaaacgcaa
caggtttcagctgcggcaatcggaactgcaacacactatttattgcaattgctgccatta
gaaacgccgactactgagtcgatccaagcattactagatgaattagttaaaaagcgttta
gtggatcaaaaggtagccaaaaaaattgatttttctgctattctttggttttttgaaacc
gagcttggaaaagaattaatcaagcaaaaagcgcatgtcaaacgggaacaaccgttttcg
atgctgttacctgcagaacgggtctttgaacaatacccaaatgaagaagatgaattgcta
atccatgggattgttgatggttatattgagttacccacgacgattcaattatatgacttt
aagacggatttcattttagatcgtgacgatgaaacagcgattgatgcagtcattcaaaaa
tatcgtgggcaattgaatctctatcaacaggcgttgacagaatctttagaaaagcctgtc
acagatgtctttcttgtcttattaagtgcaaagaaaataataaatattaataaataa
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