Eurypyga helias (sunbittern): 104502668
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Entry
104502668 CDS
T08356
Symbol
PRPF6
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
ehs
Eurypyga helias (sunbittern)
Pathway
ehs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104502668 (PRPF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ehs03041
]
104502668 (PRPF6)
Spliceosome [BR:
ehs03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
104502668 (PRPF6)
Complex C
U5 SnRNP specific factors
104502668 (PRPF6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
PRP6_TPR
TPR_14
TPR_19
HAT_PRP39_N
Suf
TPR_16
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_17
ARM_TT21_2nd
Motif
Other DBs
NCBI-GeneID:
104502668
NCBI-ProteinID:
XP_010148988
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
ATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQMKKNQTADDDDEDLNDTNYDEFNGY
AGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERREQREKEEIEKYRMERPKIQQQFSD
LKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLTPVPDSFFAKHLQSGENHTSVDPRQ
TQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDMRKIGQARNTLMDMRLSQVSDSVSG
QTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGK
LQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAELET
DIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDARIMLSRAVECCPTSVELWLALARLE
TYENARKVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAITSLRANGVEINRE
QWIQDAEECDKAGSVATCQAIMRAVIGIGIEEEDRKHTWMEDADSCVAHNALECARAIYA
YALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLAGDV
PAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKL
EWVLGNIAAAQELCEEALKHYEDFPKLWMMKGQIEEQKELVEKAREAYNQG
NT seq
2134 nt
NT seq
+upstream
nt +downstream
nt
agccacaggtttcaccacccgctccgatatcggccctgcgcgcgatgccaacgaccctgt
ggatgatcggcatgctccgccggggaagagaactgtcggggatcaaatgaaaaagaacca
gacggctgatgatgatgacgaagatttgaacgacaccaattacgatgagttcaatgggta
cgctgggagcctcttctcaagcggtccctatgaaaaagatgacgaggaagcagatgctat
ctatgcagctctggataagaggatggatgaacgcagaaaggaaagaagggagcaacgaga
aaaagaggaaatcgaaaaataccgtatggagcgacccaaaatccagcagcagttctcaga
cttgaagcgaaagctggcagaggtcacagaggaagagtggctgagcattccagaggttgg
cgacgccaggaacaagcgtcagaggaatcctcgttacgagaagctgactcctgtacccga
cagcttcttcgcaaagcatttacagtcgggggagaatcacacttctgtggacccacgcca
gacgcaatttggtggattgaatactccatatccagggggcttgaatactccgtatccagg
aggaatgacaccaggcttaatgacacctggcacaggcgaattggatatgaggaagattgg
ccaagccaggaacaccttgatggatatgaggctgagccaggtgtcggactctgtgagtgg
ccagactgttgtggacccgaaaggatatttgacagacttgaattcgatgattcccacgca
cggaggcgatatcaatgatatcaagaaagcccgtttgctcctgaaatccgtacgagagac
caatcctcatcatccaccagcctggatagcatcagcccgactggaggaggtcactggcaa
actccaggtggctcgaaacctcatcatgaaaggaacagagatgtgccccaagagtgaaga
tgtttggttagaagcagctcggcttcagcctggggatacagccaaggctgttgtggccca
agcggtccgccaccttccgcagtctgtccggatctatataagagcagcggagctggagac
agatatccgggcgaagaaacgcgtccttaggaaagcccttgagcacgttccaaattcggt
gcgtttgtggaaagcagccgtggagttggaagaacctgaggatgccaggatcatgctgag
tcgtgctgtggagtgctgcccgacgagcgttgaactgtggttggcgctggcgaggctgga
gacatatgagaatgctcgtaaagtccttaacaaagcccgtgagaatattccaacggatcg
tcacatctggattactgctgccaaactggaggaagccaatgggaacacccagatggtgga
gaaaataattgacagagccatcacgtctcttagggctaacggcgtggaaatcaacagaga
gcagtggatccaggatgctgaggaatgtgataaagctggaagcgtggccacgtgccaggc
aatcatgcgagctgtgatcgggattgggattgaggaagaagatcggaaacatacctggat
ggaagacgcagacagctgcgttgctcataacgctctggagtgtgcccgagcgatttacgc
ctatgccttgcaagtcttcccgagcaagaagagcgtgtggctgcgagcagcctacttcga
aaagaaccacgggacgagagaatccttggaggctcttttgcagagagctgttgctcactg
tcccaaagcagaagtgctctggctcatgggagccaaatcgaagtggctggcgggagacgt
gccagcagccaggagcattctggccctggctttccaggccaaccccaacagcgaggagat
ctggctggctgccgtgaagctggagtcggaaaacaatgaatacgaacgagcgaggcggct
gctggcgaaagctcgcagcagtgcccccactgccagggtcttcatgaagtctgtgaagtt
agagtgggtgcttgggaacatcgctgcagcccaggagctttgtgaggaagccctgaagca
ctacgaggactttcccaagctctggatgatgaagggacaaatcgaggaacaaaaggagct
ggtagagaaagcacgagaggcttataatcaaggg
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