Eurypyga helias (sunbittern): 104502813
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Entry
104502813 CDS
T08356
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
ehs
Eurypyga helias (sunbittern)
Pathway
ehs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104502813 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ehs03041
]
104502813 (CDC40)
Spliceosome [BR:
ehs03041
]
Complex C
Other components
Step II factors
104502813 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
WD40_WDHD1_1st
EIF3I
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_NWD2_C
WD_LRWD1
Beta-prop_Vps41
PQQ_2
Motif
Other DBs
NCBI-GeneID:
104502813
NCBI-ProteinID:
XP_010152452
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MSVLFQEDVETGVHLDPAVKEVQYNPTYDTMFAPEFGPENPFRTQQMAAPRNMLSGYAEP
AHINDFMFEQQRRTFATYGYALDPSIDNPEVATKYIGSVEEAEKNQGLTVFETGQRKIEK
RKKFKENDASNIDGFLGPWAKYVDEKEVAKPSEEEQKELDEITAKRQKRGRLEDDKPGEE
KTILHVKEMYDYQGRSYLHVPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLF
PLSGHILLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNNAGTRFLSAAYDRYLK
LWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRH
LGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLA
CQSMDNQILIFGAQNRFRLNKKKVFKGHMVAGYACQVDFSPDMSYVISGDADGKLNIWDW
KTTKLYSRLKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttttatttcaggaagatgtggaaacaggagtccaccttgatcctgctgtcaag
gaagttcaatacaatcccacttacgataccatgtttgcacctgagtttggaccagaaaac
ccatttaggactcaacaaatggctgcgcctagaaatatgctttctggatatgcagaacca
gctcacatcaatgatttcatgtttgaacaacaaaggagaacatttgcaacctatggttat
gcgttagatccctctatagataatcctgaggttgctaccaaatatattggctctgtagaa
gaagctgaaaaaaatcaaggtttaacagtgtttgaaacaggacaaaggaaaattgaaaaa
cggaagaaattcaaggagaatgatgcatctaatattgatgggtttctgggaccatgggca
aagtatgttgatgaaaaagaagtagccaaaccatcagaagaagagcagaaagagttggat
gaaataacagctaagaggcagaagagaggaagactagaagatgataaacctggagaggag
aagactatattacatgttaaggaaatgtatgactatcagggaagatcttatcttcatgtt
cctcaagatgttggagttaatctccgttctacagtgccacctgagaagtgctatcttcca
aagaaacaaattcacgtgtggtctggacatactaagggtgtcagtgcagttagactgttt
cctctctctgggcatatactgttgtcttgctctatggattgcaaaattaagctatgggaa
gtatatggtgaccgaagatgtctacgaacatttattggacacagtaaagctgttcgagac
atctgttttaacaatgctggcacccggtttctcagcgctgcttatgaccgctatcttaaa
ctctgggacactgaaacagggcaatgtatttcaagattcacaaacaggaaggttccttac
tgtgtcaagttcaatcctgacgaagataaacaaaatctctttgtcgcgggaatgtctgat
aagaaaattgtgcagtgggatattcgaagtggtgagattgtgcaggaatacgataggcat
ttgggagctgtcaacaccattgtgtttgtggatgaaaatagaaggtttgtgagcacatct
gatgacaagagtttaagagtctgggaatgggacattcctgtagactttaagtacatagct
gagccaagtatgcattccatgccagccgtgactttgtctccaaatgggaaatggttggct
tgccagtcgatggataaccaaattctcatttttggcgctcagaacagattcagattaaac
aaaaagaaagttttcaaaggtcacatggtagctggctatgcttgtcaagtggatttttca
cctgacatgagctatgtgatatctggagatgcagatggaaaactcaacatctgggactgg
aagacgacaaaactctacagcaggttaaaagcacacgataaagtctgtatcggtgcagtg
tggcacccgcacgaaacatctaaagtcattacgtgtggctgggatggccttattaaactg
tgggactag
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integrated database retrieval system