Eurypyga helias (sunbittern): 104502961
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Entry
104502961 CDS
T08356
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
ehs
Eurypyga helias (sunbittern)
Pathway
ehs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104502961 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ehs03021
]
104502961 (CPSF3)
03019 Messenger RNA biogenesis [BR:
ehs03019
]
104502961 (CPSF3)
Transcription machinery [BR:
ehs03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104502961 (CPSF3)
Messenger RNA biogenesis [BR:
ehs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104502961 (CPSF3)
U7-dependent histone pre-mRNA processing factors
104502961 (CPSF3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
DUF1611
Motif
Other DBs
NCBI-GeneID:
104502961
NCBI-ProteinID:
XP_010148642
LinkDB
All DBs
Position
Unknown
AA seq
583 aa
AA seq
DB search
MSFCRGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHF
HLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESM
DKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAE
IPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLI
LDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKHISNLK
SMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEPE
EITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMARLKAALI
REYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADKKPEQGQRISGILVKRNFNY
HILSPCDLSNYTDLAMSTVTQTQAIPYTGPFNLLYYQLQKLTGDVEEIEIQQKPALKVFK
NITVIQEPGMVVLEWVANPANDMYADTVTTVILEVQSNPKIQK
NT seq
1750 nt
NT seq
+upstream
nt +downstream
nt
atgtccttttgcagaggtgctggccaagaagtaggaaggtcatgcattattctggaattt
aaaggaagaaaaataatgcttgattgtggaatccatcctggactggaaggaatggatgct
cttccttacattgatttgatagatcctgctgagattgatctcctcttaattagtcacttc
catttagatcactgtggggctttaccgtggtttttgcagaaaacgagttttaaagggagg
acgtttatgactcacgccacaaaagctatttacagatggcttctctcagactatgtcaaa
gtcagtaatatatcagcggatgacatgctatatacagaaacagaccttgaagaaagcatg
gacaagattgagaccatcaacttccatgaagttaaagaggtggcaggaatcaaattctgg
tgttaccacgcgggccacgttctgggagcagccatgtttatgattgaaatagctggtgtg
aagctcttatatacaggtgacttctcaagacaggaagacagacatctgatggcagctgag
attcccaatattaaacctgatattcttataattgaatccacctatggtactcatattcat
gaaaaaagggaagagcgagaggcaagattctgtaacaccgttcacgacattgtaaataga
ggaggtagaggtcttattccagtgtttgccctgggtcgagctcaagaactgcttttaatt
ttagatgaatactggcagaatcaccctgaactccacgatatccccatatactacgcctcc
tctttggcgaagaagtgcatggcagtttatcagacctatgtcaatgccatgaatgacaaa
atccgcaagcaaattaacatcaacaatccgtttgttttcaagcatatcagtaatctgaag
agcatggatcatttcgatgacattggcccaagcgtggtgatggcttccccaggtatgatg
cagagtggcttgtccagagagttgtttgagagctggtgcacggataagagaaacggagta
attatagcaggttactgtgttgaaggaacgcttgcgaagcacatcatgtctgaacctgaa
gagatcacaactatgtcagggcaaaaactcccactgaagatgtctgtggattacatttct
ttctctgctcacacagattatcaacaaaccagtgaatttatccgggccctgaaacctcca
cacgtgattttagttcacggagagcagaatgaaatggccagattgaaagcagctttgata
cgggaatatgaggataatgatgaagttcatatagaagttcataatcctaggaatactgaa
gctgtgacattaaacttcagaggagaaaaacttgcaaaggtgatgggatctttagcagat
aagaagccagaacaaggacagagaatttctggaatcctagttaaaagaaattttaattat
cacatcctgtctccatgtgacctctccaattatacagacctggcgatgagcaccgtgaca
cagacacaagccattccgtatactggcccttttaacctgctttattatcagctacagaaa
cttactggtgatgtagaagaaatagaaatccaacaaaaaccagccctgaaggttttcaaa
aatattactgtgatccaggaaccgggcatggtagtccttgagtgggtggcaaatcctgct
aatgatatgtatgcagacaccgtgacaacagtgatactggaagtgcagtcaaatcccaaa
atacagaaag
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integrated database retrieval system
