Eurypyga helias (sunbittern): 104503143
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Entry
104503143 CDS
T08356
Symbol
CNOT6L
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
ehs
Eurypyga helias (sunbittern)
Pathway
ehs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104503143 (CNOT6L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehs03019
]
104503143 (CNOT6L)
Enzymes [BR:
ehs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
104503143 (CNOT6L)
Messenger RNA biogenesis [BR:
ehs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104503143 (CNOT6L)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104503143 (CNOT6L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
104503143
NCBI-ProteinID:
XP_010152649
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MPKEKYDPPDPRRIYTIMSAEEVANGKKSHWAELEISGRVRSLSTSLWSLTHLTALHLND
NNLTRIPPDIAKLHNLVYLDLSSNKLRSLPAELGNMVSLRELLLNNNLLRVLPYELGRLF
QLQTLGLKGNPLSQDILSLYQDPDGTRKLLNYMLDNLAGDSPTNLTDRIHPEQLPPRPWI
TLKERDQILPSASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADI
ISLQEVETEQYFTLFLPALKERGYDGFFSPKSRAKIMSEQEKKHVDGCAIFFKTEKFTLV
QKHTVEFNQVAMANSEGSEAMLNRVMTKDNIGVAVVLEVHKELFGASEYGRGMKSLHVDK
QLLIVANAHMHWDPEYSDVKLIQTMMFVSELKNILEKASSRPGSPTADPNSIPLVLCADL
NSLPDSGVVEYLSNGIVADNHKDFKELRYNECLMNFSGNGKNGASEGRITHGFQLKSAYE
NNLMPYTNYTFDFKGVIDYIFYSNTHMNVLGVLGPLDPQWLVDNNITGCPHPHIPSDHFS
LLTQLELHPPLLPLVNGVHLPNRR
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggaaaaatatgatcctccagatcctcgcagaatttacaccatcatgtcagca
gaagaggtagccaatgggaagaagtcacactgggctgaactagagatctcgggtagagtg
cggagcttaagtacgtccctttggtcgctgacgcacttgactgctctgcacctcaatgac
aataatcttactcgcattccacctgatattgccaagcttcataatctggtttacctggat
ctgtcatccaacaaactcagaagtttaccagcagaactaggaaacatggtatctctcagg
gaattgcttttaaataacaatctgttacgggttttgccttatgaacttggacggctcttc
cagctacaaaccctaggtttgaaaggcaatcctttgtcacaagatattctcagcctctac
caggatccagatggaactcgaaagctactgaactacatgcttgacaatctagcaggtgac
agccctacaaatctgactgacagaattcatccagagcagctgcctccaaggccgtggatt
actttaaaagaacgagaccaaattctgccctcagcttcattcacagttatgtgttacaat
gtgttgtgtgataaatatgccacccggcagctctatggctactgcccatcttgggcactc
aattgggagtatagaaaaaagggaataatggaagaaattgtcaactgcgacgcagatatc
attagtcttcaggaagtggaaacagagcaatacttcaccctttttctgccagctttgaaa
gaacgaggatacgatggattcttttctccaaagtcacgtgccaaaatcatgtctgagcag
gagaaaaaacatgtggatggctgtgcaatattcttcaaaaccgaaaaatttacgctggtg
cagaagcacaccgtggagttcaaccaggtggcgatggctaactctgaaggttcagaagct
atgttaaacagagtgatgacgaaggacaacatcggagtcgccgtggtgttagaggtgcac
aaagaattatttggagcaagtgagtatggccgtggtatgaaatcgcttcatgtggacaaa
cagctgcttattgtggccaatgcccacatgcactgggaccctgaatactctgatgtgaaa
ctcattcagaccatgatgtttgtctcggaactgaaaaatatcctcgagaaagcctcgagc
aggcctggcagcccaacagcagatcctaactctatccctctggtgctgtgtgcggatctc
aactcactgcctgattcaggtgtagtggaatacttaagcaatggcatagtagctgacaac
cacaaggacttcaaggagttgcgttataacgagtgtctcatgaacttcagtggcaatgga
aaaaacggggcttctgaaggaagaattacgcatggcttccaactcaagagcgcctatgaa
aacaacttgatgccttacaccaattacacttttgatttcaaaggtgtgattgactacatt
ttctattccaacactcacatgaacgtgcttggtgtcctggggcctttggaccctcagtgg
ctggttgacaacaacatcactgggtgtccacaccctcacatcccttcagaccacttctca
ctgttaacacaactcgaactccatcctccgctcctgcctcttgtcaacggtgtgcacttg
cctaacaggaggtag
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