Eurypyga helias (sunbittern): 104503448
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Entry
104503448 CDS
T08356
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
ehs
Eurypyga helias (sunbittern)
Pathway
ehs03030
DNA replication
ehs03420
Nucleotide excision repair
ehs03430
Mismatch repair
ehs03440
Homologous recombination
ehs03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104503448 (RPA1)
03420 Nucleotide excision repair
104503448 (RPA1)
03430 Mismatch repair
104503448 (RPA1)
03440 Homologous recombination
104503448 (RPA1)
03460 Fanconi anemia pathway
104503448 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ehs03000
]
104503448 (RPA1)
03032 DNA replication proteins [BR:
ehs03032
]
104503448 (RPA1)
03400 DNA repair and recombination proteins [BR:
ehs03400
]
104503448 (RPA1)
Transcription factors [BR:
ehs03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
104503448 (RPA1)
DNA replication proteins [BR:
ehs03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
104503448 (RPA1)
DNA repair and recombination proteins [BR:
ehs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
104503448 (RPA1)
MMR (mismatch excision repair)
104503448 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
104503448 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
DUF4939
CATSPERD-E_C
IBR
Motif
Other DBs
NCBI-GeneID:
104503448
NCBI-ProteinID:
XP_010158103
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
AIMQGENVSKPVLQVINTRAIATGNGPPRYRVLMSDGVNTLSSFMLATQLNPLVEEERLS
AQCICQVNKFIVNSLKDGRRVVILMDVNVLKTADKVGGNIGNPVPYNEGQGQQRSSAPAA
NPAPCNPQQQNGNLSAAGPAAPKYHAPSNQFGKASAPSAVKTPGGSQAKVVPIASLNPYQ
SKWTIRARVTQKSHIRTWCNARGEGKLFSIDLVDESGEIRATAFNDQADKLFPLIELNKV
YYFTKGNLKTANKQYTAVRNDYEITFTNETSIVPCDDAQHLPSVQFEFVSISDLENTPRD
SIVDVIGICKSYEDVTKIIVKASNREVSKRNVHLMDTSGKLVTATLWGNEAEQFDGSRQP
VVAIKGARVSDFGGRSLSVMSSSTIVINPDISETFKLRGWFDSEGQLLEGASISDVRGGP
AAGTNANWKTLSEVKLENLGQGDKADYFSCVGTVVHLRKENCMYQACPSPECNKKVIDQQ
NGLYRCEKCDREFPNFKYRMMLLVTIADSLEYQWVTCFQESAEFILGHNAAFLGELKEKN
EQAFEEVLQNANFNTYEFRIRVKLETYNDESRIKATALDVKPVNHREYGRRLIASIRRNA
QLG
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
gccataatgcagggggagaacgtctccaagcctgtcctgcaagtcatcaatacgcgggct
attgctacaggaaacgggccgcctcgttaccgagtgttgatgagcgatggggttaacaca
ctctcctcgttcatgttggcaacacagctgaaccctctggtggaagaggaacgcttgtca
gcccagtgtatttgccaggttaacaaattcatcgtcaacagcctgaaagatggaaggaga
gtggttatactgatggatgtaaatgttctgaaaactgctgataaggttggtgggaatatc
ggcaatccagtgccgtacaatgaagggcaagggcagcaacgttcttcagctccagcagca
aacccagcaccctgcaacccacagcagcaaaacggcaatttgtcagcagcaggtcctgct
gctcctaagtaccatgctcccagcaaccagtttggcaaagcgagcgctcccagtgcagtg
aagacaccggggggatcgcaggccaaagtagtgccgattgccagcctgaacccgtaccag
tccaagtggaccattcgcgctcgtgttacccaaaaaagccatatccgcacgtggtgcaac
gcccgtggtgaaggaaagctcttttctatagacctagttgatgaaagcggggagattaga
gctactgcattcaatgatcaagcagacaagctctttccgctcattgaattgaacaaggta
tattattttaccaaaggcaatttgaagactgctaacaagcaatatacagctgttaggaat
gactatgagattacattcactaatgagacttcgattgtgccctgtgatgatgcccagcac
cttccatctgttcagtttgagttcgtctccatctctgacttggaaaacacgcccagagac
tcaattgttgatgtaattgggatttgtaagagctatgaagatgtcactaaaattatagtg
aaagctagcaatagggaggtgtccaagaggaacgtgcacctgatggatacgtcagggaaa
ctggtgacagctacgctgtggggaaatgaggctgaacagtttgatggttctagacaacct
gtggtcgccatcaaaggagcccgagtctctgattttggtggtagaagcctgtctgtcatg
tcctccagtacaattgtcatcaaccctgacatctcagagacgtttaagctccgaggatgg
tttgactctgaggggcagctcctggaaggtgcctccatctctgatgtgaggggcgggcca
gcagctgggacgaatgccaattggaaaactttgtccgaagtcaaattggagaacttggga
caaggagataaggcagattattttagctgtgtgggcacagtcgtacatctgcgcaaagag
aactgtatgtaccaggcctgtccctctccggaatgcaataagaaagtgatagaccaacaa
aatggactgtatcgttgtgaaaagtgtgatcgtgaattccccaacttcaagtaccgcatg
atgctgctggtgaccattgcagactctctagagtatcagtgggtgacttgtttccaagag
tcagcggaattcattcttgggcacaacgctgctttcctgggagaactgaaggaaaagaac
gagcaggcgtttgaagaagtgctccaaaatgcaaacttcaacacctatgagttcaggatc
cgagtaaaactggagacttacaatgatgagtcgcgtattaaggctacggcattggacgtg
aaacctgtgaaccatcgagaatacggtaggaggttgatcgcaagcatcagaagaaacgct
cagctgggatga
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integrated database retrieval system
