Eurypyga helias (sunbittern): 104504663
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Entry
104504663 CDS
T08356
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
ehs
Eurypyga helias (sunbittern)
Pathway
ehs04512
ECM-receptor interaction
ehs04514
Cell adhesion molecule (CAM) interaction
ehs04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104504663 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
104504663 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104504663 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ehs04131
]
104504663 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ehs04090
]
104504663 (SDC1)
00535 Proteoglycans [BR:
ehs00535
]
104504663 (SDC1)
Membrane trafficking [BR:
ehs04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
104504663 (SDC1)
CD molecules [BR:
ehs04090
]
Proteins
104504663 (SDC1)
Proteoglycans [BR:
ehs00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
104504663 (SDC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
104504663
NCBI-ProteinID:
XP_010147896
LinkDB
All DBs
Position
Unknown
AA seq
303 aa
AA seq
DB search
ISSLTHLFSFSLKQTTNLNLPPEDLDSSGDDDDAFSGSGAGPLTDQSRILRIPGELTNSS
LLATPVNFHEQPFPGIESRTEKEVISPSATSSVVTEDPVVAVKGEVAVLGSPDDKPTNDV
VTTTVRSPTTHFPSVVHVTPSEASGTVRELEPQIPSSDVPDTKDVPEPHSTIHHEGDVTA
TPTTTAPKDVVPTPEEASEDGSGDPGDFILTKDDDLAPTQSSEVPADSGRNAKAAGASGI
MDRKEVLGGVIAGGLVGLVFAVFLVAFMLYRMKKKDEGSYSLDEPKQSNGGYQKPHKQEE
FYA
NT seq
914 nt
NT seq
+upstream
nt +downstream
nt
caatctcatcactaacacaccttttctccttctctttaaagcaaactacaaatttgaacc
ttcctcctgaagatcttgattcatccggtgatgacgacgatgcattctcaggttcaggtg
caggtcccctgactgaccagtctcgcatcttgagaatcccaggagaactgactaattcgt
cattactggcaacaccagtgaatttccatgaacagccatttcctgggattgagagccgaa
ctgaaaaggaagtaatatctccttctgcaactagcagtgtagtgacagaggatccagttg
tagctgtgaagggtgaagtagccgtcctgggttcacctgatgacaaacccacaaatgatg
tggttaccacaacagtgagaagccccactactcactttccttcggtggttcatgtaactc
cctcagaagcctcaggcacagtccgtgagcttgaacctcagatccctagctctgacgtgc
cagacaccaaagacgtgcctgagccccactctaccatccaccatgagggggacgtcactg
ccacccccacgacgacggctccgaaggacgttgttcctacacctgaggaagcttctgaag
atggctctggagacccgggagacttcatcttgactaaagatgatgatttggcccccaccc
agagctcagaagtaccggctgactctgggaggaatgccaaagcagcgggagcctcgggaa
ttatggacagaaaagaagttcttggaggtgttattgctggaggactagtaggcttggtgt
ttgcagtgtttctagttgcatttatgctgtacagaatgaagaaaaaagacgaaggcagct
attcactggacgaaccaaaacagtctaacggaggataccaaaaaccacacaaacaagaag
aattctatgcataa
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