Eurypyga helias (sunbittern): 104504756
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Entry
104504756 CDS
T08356
Symbol
CPSF6
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
ehs
Eurypyga helias (sunbittern)
Pathway
ehs03015
mRNA surveillance pathway
ehs03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104504756 (CPSF6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104504756 (CPSF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehs03019
]
104504756 (CPSF6)
Messenger RNA biogenesis [BR:
ehs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
104504756 (CPSF6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
104504756
NCBI-ProteinID:
XP_010158561
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
EAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDSLPPSVGDDVGKGAAPNVVYTYTGKR
IALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKL
MDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQMSGEGKAGPPGGSSRAAFPPS
NRGRGRFPGAIPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLP
PPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPP
GPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPANSGIPTSDSRGPPP
TDPYGRPPPYDRGDYGPPGRRFTGNNMSIREKLHIPFYGRHTKNNTQNSGREMDAARTPL
SEAEFEEIMNRNRAISSSAISRAVSDASAGDYGSAIETLVTAISLIKQSKVSADDRCKVL
ISSLQDCLHGIESKSYGSGSRRERSRERDHSRSREKSRRHKSRSRDRHDDYYRERSRERE
RHRDRDRDRDRERDREREYRHR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
gaagctgaatatggtggacatgatcagattgatttatatgatgatgtaatttctccatct
gcgaataatggagatgccccagaagatcgtgattacatggattctctcccaccgtctgtt
ggggatgatgtaggtaaaggagctgcaccaaatgttgtctatacatatactggaaagaga
attgccttgtacattggaaatcttacttggtggacaacagatgaagacttaactgaagca
gttcattcattgggggtaaatgatattttggagataaaattttttgaaaatcgtgctaat
ggccagtctaaagggtttgcccttgtgggtgtgggatcggaagcatcctccaaaaagttg
atggatttgttgcctaaaagagaattgcatgggcagaatcctgttgtaactccatgtaac
aaacaatttctgagtcagtttgaaatgcagtcaaggaaaaccacacagtctggccagatg
tctggggaaggtaaagctggtcccccaggaggaagctcacgagcagcatttccacctagt
aatagagggcgaggccgttttccgggtgccattccaggtggagacagattccctggaccc
gcagggccaggaggaccaccaccacctttcccagctggacaaactcccccacgtccacct
ttaggtcctcctggcccaccaggccctccaggccctccacctcctggtcaggtcctccca
cctccattagctggacctcctaatcgtggtgaccgtccaccaccaccagttctgtttcca
ggacagccttttggtcagcctccacttgggccacttcctccaggccctcctccaccagtt
ccaggctatgggccaccaccaggtccgccaccacctcagcagggtccacctccacctccg
ggtccatttccccctcgtccgcctggccctcttgggcctcccctgactcttgctcctcct
ccacatctccctgggccacctccaggtgctccaccacctgcaccacatgtgaatccagct
ttcttccccccacctgccaatagtggcatacctacttcagacagccgtggcccgcctccg
acagatccatatggccgacctccaccatatgacagaggtgactatgggccacctggaagg
cgtttcactggaaataacatgtccataagagaaaaattacatattccattctatgggagg
cacacgaaaaataatactcaaaactcagggagggaaatggatgctgcaaggacgcctcta
agcgaagcagaatttgaagaaatcatgaatagaaatagggcgatctcaagcagtgccatt
tcgagagctgtatcagatgccagtgctggggactatggaagtgctatagagaccttggta
acagcaatttccttaattaaacagtccaaagtatctgcggatgatcgctgtaaagtactt
attagctctcttcaggactgccttcatggaattgagtccaagtcttatggttctggatcc
agacgtgagcgatccagagagagggaccacagtaggtcacgagaaaaaagtaggcgccac
aaatcgcgtagtagagatcgtcatgatgactattaccgggaaagaagccgcgaaagagag
agacatcgtgaccgcgacagagatcgtgacagagaacgggacagagagagagagtatcgt
caccgttaa
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