Eurypyga helias (sunbittern): 104505357
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Entry
104505357 CDS
T08356
Symbol
TOPBP1
Name
(RefSeq) LOW QUALITY PROTEIN: DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
ehs
Eurypyga helias (sunbittern)
Pathway
ehs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104505357 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ehs03032
]
104505357 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
ehs03400
]
104505357 (TOPBP1)
DNA replication proteins [BR:
ehs03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
104505357 (TOPBP1)
DNA repair and recombination proteins [BR:
ehs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
104505357 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
104505357
NCBI-ProteinID:
XP_010153811
LinkDB
All DBs
Position
Unknown
AA seq
1523 aa
AA seq
DB search
MKGSKEPFFVKFIKSSGSSEHFLKALESMKEFQSEEHLQILEEEAALSIKENDKSLYICD
PFGGVVFNHLKKLGCRIVGPQVVLYCMQSQRCVPRAEYPVYNMTMADVTVSCTSLEKDVR
EEVHKYVQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAASLKKPILLPSWVTTLWDKSQQ
SIMRYTDVNVEDYACPVFLGCTICVTGLSSLDRKEVQRLTAEHGGQYTGQLKMNECTHLI
VQEPKGQKYECAKKWNVHCVSVQWFSDSIEKGFCQDETIYKIEAGSKLSSTPSTSTPTNH
ASKPDYHNFSDVSRISNVNLSGVNETACSSAMSSRLDPLPDELENLDISSFQAPEDLLDG
CRIYLCGFSGRKLDKMRRLINCGGGFRFNQLNEDVTHIILGESNDELKHFMDRTAHRPHV
VTAKWLLESFSKGYLHPVEQYVPVNYQLLENPVLDQPGMKSVLPKNNNLLKNKEAVNVTK
HQKAAEDDFLSQYVNNDSALGTFXAQPTLDTEKLTPGTFSDVTHLTVQEENQSSICNGSL
GESSALADGGLFVRKRFLLLGFGEEDESCIADIIKENAGKILPLQSRTVADYAVVPLLGC
TVKLTVGDVVTNTWLITCVEQQLILDPQSNPLFTPVPVMEGVAPLEDCVLSFSQFTGAER
ESLVYLAGLLGARVQEFFVRKANAKKGMFASTHLVAREPDGSKYEAAKKWNLPAVTVAWL
LQSARTGKRAEESKFLVENAQSEDKERSITQLSKTPTTVKSSDSDQPAYLLEAGKKPAVT
PLDINRFQSKAFQAVISHHVGKTTPLAQGGLPQKEPSLHLDTPSKFLSKDKLFKPSFDVK
DALAALETPGGPDQKTRKLSTPLSEVIGRNLKLALANSTRHTAALTASPQLTTAQPETEE
ERKPLADVVIYVSKKLCKKQSELNAVAASLGADYRWCFDETVTHFIYKGGQNDNNKEYKS
VRERGVHIVSEHWLLESAQEYRRLPESLFPHTYNPKMSLDISAVQDFSLSSSSKLPSTGK
LAEEDEIIPVDEDDVTTDQIKEMDTAREGQIVTSESKGVLTQALEMRENFQRQLQEIMSA
TSLVKPQGQRGSLSRNSFDGSPATPESTRSVRNGRSRVLEALRQSRQALADMNTEPSQSE
QIIWDDPTAREERARLVSNFQWPNSPSQYPEQGQSNANKNTDDSAFKGSLADAEIAGIAV
PEAGDGDLTEDLKNPGGRDPETPIKNHLIPTPQAPSIAFPLANPPVAPQPKEQWITYEEA
AEEPEKPRKFQLSSLNPQERFDYCHLIEELGGVVLEKQCFDPSCTHIVVGHPLRNEKFLA
SMAAGKWVLHRSYLEACRGAGCFVQEEDYEWGSNSILNVLPGINVNQKKLALAAMRWRKK
IHKGRQETGIVEGAFSGWKVILNVDQTKEAGFRRLLQSGGAKVFPGHSVSLFKEVTHLFA
DFSKLKPDDTRVNVAEAAAQGVHCLRPEYIADYLIQDPPPPVESYCLPDAESYLHNNAEL
GTGLSQKRKALGEMSRIKRSRIH
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtagtaaggagccgttttttgtgaaattcatcaagtcgtctgggagctcggag
cattttttgaaagctcttgagtctatgaaagaatttcagtcagaagagcatctgcagatt
cttgaagaagaagcagcgctcagtataaaagaaaatgataaatcactttacatttgtgat
ccttttggaggcgttgttttcaaccatctcaaaaagcttggctgtagaattgttggacca
caggtagtcctgtactgcatgcagtcccagcgatgtgtcccaagagctgagtatcctgtg
tacaatatgaccatggctgatgtaacggtatcctgcaccagccttgagaaagatgtcagg
gaagaagttcacaaatatgtgcagatgatgggtggacgtgtgtacagggacctcaatgtg
tcagtaactcatcttatagctggagaagttggcagcaagaaatacttggtagcggcttcg
ctgaaaaaacctattttgctaccctcttgggttacaacactgtgggacaagtctcagcaa
agcataatgagatacactgatgttaacgtggaagactacgcttgtcccgtgttccttggc
tgtacaatttgcgtaactggcttaagcagtttagacaggaaagaagttcagcgcctcact
gctgaacacggcgggcagtatacggggcagctgaagatgaatgaatgtactcacctcata
gttcaagagccaaaaggtcagaagtacgaatgtgccaaaaaatggaatgtgcactgtgtg
tctgtgcagtggttttctgacagcattgagaaaggcttctgtcaggatgagacgatatat
aaaatagaggctggatcaaaactgagtagtacacccagtacatcaacacctacaaatcat
gccagcaagcccgattatcacaacttttcggacgtcagccgcatttccaatgtcaatttg
agtggtgttaatgaaacggcatgtagttctgctatgagcagcaggctggatcctcttcct
gatgagctggaaaacttggatataagttcttttcaagcccctgaagatttgttagatggt
tgtcgaatctatctgtgtggcttcagtggcaggaagttggacaagatgagaaggctaatt
aattgtggtggtggttttcgattcaatcagcttaatgaagatgttacccatatcatttta
ggggaaagtaatgatgagctgaaacactttatggacaggacagctcacaggcctcatgta
gtgacagcaaaatggttgctggaatcatttagtaaaggttatctgcatccagtggagcag
tacgtccctgtaaactaccagctgttagagaacccagttttggatcaacctggaatgaag
tcagttcttccaaaaaataacaatctcttgaagaacaaagaagctgtgaacgttacgaag
catcagaaagctgctgaagatgacttcctctctcagtatgtgaataacgattctgcctta
ggtacgttctaggctcagcctaccctagacacagaaaaactaacacccggaaccttcagt
gatgttactcacttgacagttcaagaagagaatcagtcttccatttgtaatggctctttg
ggagagtcttctgcgctggctgacgggggcttatttgtcagaaagagatttcttcttttg
gggtttggtgaagaggacgagtcctgcattgcagatattataaaggagaatgcggggaaa
attctgccgctgcaaagcagaaccgttgcagactatgctgtggtacctttgttggggtgc
acggtgaagctgactgttggtgatgttgtcacaaatacgtggctgataacatgtgtggaa
cagcagctcattttagacccccagtccaatccactttttacgccagtcccagtaatggaa
ggagttgcccctctggaggattgtgttctctcttttagccagttcactggtgcagagaga
gagtccctggtttatctggcaggattgctaggagccagagtccaagaattctttgtgcgg
aaagccaatgcaaaaaaaggaatgtttgccagtacccatcttgtggcaagagaaccggat
ggttccaagtatgaagctgcgaagaagtggaatttgccggcagtcactgtagcctggctt
ttgcagtctgcaaggacaggaaagagagcagaggaaagcaagttcttggttgaaaatgca
cagtctgaagataaggagaggtccattactcagcttagcaagacaccgacaactgttaaa
tcttctgattcagaccaacctgcttatctccttgaagctggaaaaaaaccagctgtgacc
cctcttgatatcaacaggttccagagtaaagctttccaagctgtaatctctcatcacgtt
gggaagacaacccctcttgcacaagggggactgccacagaaagaaccatctttacatctt
gatacaccatcgaagtttctttccaaagacaagttattcaagccctcttttgatgtaaag
gatgctctggcagctttggaaactccaggaggtcctgatcaaaaaacgaggaaactgagc
acccctctctctgaagtcatcggcaggaacttgaaattggcgctggcaaacagcacaagg
catacagcagctcttacagccagccctcagctgaccactgcacaaccagaaacggaagaa
gagcgcaagcctctagccgatgtcgttatatatgtcagtaaaaaactttgcaagaagcaa
agcgagctgaatgccgtagcagcttctctgggggcagactacagatggtgctttgatgaa
acagtaacacacttcatctacaagggaggacaaaatgacaacaataaggagtacaaatcc
gttagagaacggggtgtacatattgtttcagaacactggcttttggagagtgcccaggaa
tatagacggcttcctgaatctctctttcctcacacttacaatcccaaaatgagcctggac
atcagtgcagtgcaagatttcagtctctcctcttccagtaaacttccatcaactggaaaa
ctagcagaggaagacgagattattccagtggatgaagatgatgtaactactgaccagata
aaggaaatggacactgcaagggaaggtcaaattgtaacaagtgaatccaaaggagtttta
acccaagcactagaaatgagggagaacttccaaaggcagctgcaggagatcatgtctgcc
acatcgctggtgaaaccacaggggcagagaggatccctttcaaggaacagttttgatggt
tctccagccactcctgagagcacacggtctgtgcgaaatggccgcagcagggtcttggaa
gctctaaggcaatcccgtcaggcacttgcagatatgaacacagagccatctcagagtgag
cagatcatctgggacgatcctactgccagagaggagagagcaagacttgtcagcaacttt
cagtggcctaatagtccttcccagtatcctgagcaaggtcagagtaacgccaataagaac
acggatgactctgccttcaaaggatctttagctgatgcagagattgctggtatagctgtt
cctgaggctggggatggagatttgaccgaagatctaaagaatcctggaggtcgagatcct
gaaacaccgattaaaaatcacttgatccccactccgcaggcccccagcattgctttccca
ctggccaaccctcctgtggcaccccagcccaaagaacagtggatcacttatgaggaggct
gctgaagaaccagaaaaaccccgtaaatttcagctgtcttcccttaatcctcaagaaaga
tttgattactgccatctgattgaggaattaggtggagtagtactcgagaaacagtgcttt
gatccgagttgcacacacattgttgtgggacatcctcttcgaaacgaaaaattcttggcc
tcgatggcagctgggaagtgggtgcttcaccgttcctacctggaggcgtgcagaggagct
ggctgctttgtacaggaagaagattacgagtggggaagtaattccatacttaatgttttg
cctggaatcaatgtaaaccagaagaaactagcccttgcagccatgagatggaggaaaaag
atccacaaagggaggcaagaaactggtattgttgagggagctttcagtggctggaaagtg
atcctgaatgttgatcaaaccaaagaagcaggattcaggcgtcttcttcagtcaggagga
gcaaaagtgtttcctggtcattctgtgtctctctttaaagaagtgactcatctctttgct
gacttcagtaagctgaagccagatgacaccagggttaacgtagcagaggcggcagcccaa
ggagtgcactgcctgagaccggagtacatcgcggactacctcatccaggatccacctccc
ccagtggagtcttactgcctgccggacgctgaatcttaccttcacaataacgcagaactt
ggaactggattatcccagaagagaaaagcactgggagaaatgagcagaatcaagcgatcc
agaatacactga
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integrated database retrieval system
