Eurypyga helias (sunbittern): 104505545
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Entry
104505545 CDS
T08356
Symbol
YTHDC2
Name
(RefSeq) probable ATP-dependent RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
ehs
Eurypyga helias (sunbittern)
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ehs03041
]
104505545 (YTHDC2)
Enzymes [BR:
ehs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104505545 (YTHDC2)
Spliceosome [BR:
ehs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104505545 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
OB_NTP_bind
HA2_C
Helicase_C
Ank_2
HA2_N
Ank
Ank_4
Motif
Other DBs
NCBI-GeneID:
104505545
NCBI-ProteinID:
XP_010144884
LinkDB
All DBs
Position
Unknown
AA seq
938 aa
AA seq
DB search
EKQQSTLTEWCFAQENNRKPDSQRQKSVPSATAEYNLLDDGGDTVLNQMTEKDANCLEPW
LIKEMDSCLSDIWLHRDVDSFAQVFHLILTENVSVDYRHSETSVTALMIASGRGFLSQVE
ELISMGANIHCRSSNGWMALDWAKHFGQAEVVDLLESYSASMEIGNLDESSLVQTSGNDL
DAEDRDLLKAYHHSFDDEKVDLDLIMHLLYNICCNSDAGAILIFLPGYDEIVKLRDRILF
DDKRFADNAHRYQVFMLHSNMQTFDQKKVLKVPHSGIRKIILSTNIAETSLTVNDVVFVI
DSGKMKEKSYDALSCVTMLKMVWISKASATQRKGRAGRCQPGVCFHLFSRLRFQSMLEYQ
TPELLRMPLQELCLHTKLLAPINCPIVDFLMKAPDPPPALIVRNAVQMLKTIDAMDPWED
LTELGYHLTELPVEPHLGKMVLCAVLLKCLDPILTIACTLAYRDPFVLPTVASQKRAAML
CRKRFTAGTFSDHMALLRAFQAWQKARSDGWERTFCEKNFLSQATMEIITGMRTQLLGQL
RASGFVRARGGADIRDVNSNSENWAVVKAALVAGMYPNLVHVDRENLVLTGPKEKKVRFH
PTSVLSQPQNRKIPPANGQAAAVQALPTNWLIYDEMTRAHRIANIRCCSVVTPVTVALFC
GPARLPNNALQEPSSFRGNRVRNDGSDSEVEDETIANLALLELDEWLHLRLDPEAAVLLL
QLRQKWHSLFLRHMRAPSKPWSEADEATVKIIAHVLSSEEHSAGLQQPSGIGQRPRPMTS
EEHPLASIWRSANSRKSSAETEFSDDSSNAEKVLMKPAPPAAHQPRYKGKKSLRSKQPSD
DRSDQPSVKSTDSSSYPSPCASPSSPVSGKDSKSPSPRPNTPVRYFIMKSSNLQNIDISQ
QKGIWSTMPSNEQKLNQAFWESSMVYLIFSVQGSGHFQ
NT seq
2816 nt
NT seq
+upstream
nt +downstream
nt
aagaaaaacaacaaagcactcttactgagtggtgctttgctcaagaaaataatagaaaac
cggattctcagagacaaaaatccgtcccaagcgcaactgcagagtataatctgttggatg
atggtggtgacacagtacttaatcaaatgactgaaaaagatgcaaattgtcttgaaccgt
ggctgataaaagaaatggattcttgtctttctgacatctggttgcatagagatgttgatt
ccttcgctcaggtgttccatctcattttaactgaaaatgtcagtgttgattataggcaca
gtgaaaccagtgtgactgcactaatgattgcttcagggagaggctttctgagtcaagtag
aagaactcatcagtatgggagcaaatatccactgcagatcatccaatggctggatggctt
tggactgggctaagcattttggacaggcagaggttgttgatctgttggagtcctacagtg
cttcaatggaaattggaaatttggatgaaagttccctggtccaaacaagtggtaatgacc
tggatgcagaggacagagatctgttgaaagcttatcatcacagttttgatgatgaaaaag
tggatctggacctgattatgcacttactttataacatctgttgtaattcggatgcgggag
cgattttaatatttcttcctggatatgacgagatagttaagctgagggaccgtattcttt
ttgatgacaagaggtttgctgataatgctcacagataccaagttttcatgcttcattcaa
atatgcagacttttgatcagaagaaggtgcttaaagttccacattctggcatccgcaaaa
taattctttctactaatattgcagaaaccagcttaacagtcaatgatgttgtatttgtta
ttgactcaggcaagatgaaagagaagtcttacgatgcactgagttgtgttacaatgctaa
aaatggtgtggatttcaaaagccagtgctacccagagaaaaggcagggctggacgatgtc
agcctggagtctgttttcatctcttcagcaggctccgatttcagagtatgttggaatatc
agactccagaacttttaagaatgccacttcaggagctttgtttacacacaaaacttctgg
ctccaattaactgcccaattgttgactttcttatgaaagctcctgatcctccaccagctt
taattgtgagaaatgctgtgcaaatgctcaagaccatagatgccatggacccttgggaag
atctgactgaacttggttatcatctcactgagttaccagtagagccccaccttggtaaaa
tggtgttgtgtgctgttctgttgaagtgcctggatcctatccttactattgcttgcactc
ttgcatatcgagacccttttgtcctacctacggtggcctctcagaagcgtgcagccatgc
tgtgtagaaaacgttttactgcaggaacatttagtgaccatatggcgcttctcagggctt
tccaggcgtggcagaaggcgcgcagtgacggctgggagagaaccttctgtgaaaagaact
tcctgtctcaagccaccatggaaatcatcacaggcatgagaacgcagttgcttggccagc
ttagagcctccggttttgttagagccagaggaggagccgatattagagatgttaatagta
actccgaaaactgggctgtagttaaagctgccttagtggctggaatgtatcccaatctag
tgcatgtagacagagaaaacctggttttgactggaccaaaggagaagaaagtgcgatttc
atcctacctctgttcttagtcaacctcagaatagaaagattcccccagcaaatgggcaag
ctgcagctgttcaggcactccctacaaattggcttatatatgatgaaatgacgagagctc
acaggatagcaaatatcagatgctgttctgttgtaacacctgtcactgtggcactcttct
gtggaccagctagattaccaaataatgctttgcaggaaccttcatcctttcgagggaata
gggtgcgtaatgatggcagtgatagtgaggtggaggacgaaacaattgccaatttggcac
tgctggagctagatgaatggctccatctcagactggaccctgaggctgctgttttgttgt
tgcaactcagacagaagtggcatagcttatttctgcgtcacatgcgagctccttctaaac
cgtggtctgaagctgatgaagcaactgtaaaaataattgctcatgttctcagtagtgaag
aacattctgcaggtttgcagcagccttcaggtattggtcagaggccaagacctatgactt
ctgaagaacatcccttggcatcgatatggaggtcagccaacagtcgaaaaagctcggcag
aaactgaattctctgacgactcctctaatgctgaaaaagttttaatgaaacctgcacctc
ccgcagctcaccagccaaggtacaaaggaaaaaagagcttgcgctccaaacaaccttcag
atgacaggtcagatcaaccatcagtgaagtctacagacagcagcagctatcctagcccct
gtgctagtccttcttctccagtgtctggaaaggattccaagtctccttcaccaagaccaa
atacgccagttcgatactttataatgaaaagtagcaacttgcaaaacattgatatttctc
aacagaagggtatatggtctactatgccaagtaatgaacaaaagctaaatcaagcctttt
gggagagcagcatggtttacttaatattttctgttcaagggtctggacactttcag
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