Eurypyga helias (sunbittern): 104506317
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Entry
104506317 CDS
T08356
Symbol
BARD1
Name
(RefSeq) LOW QUALITY PROTEIN: BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
ehs
Eurypyga helias (sunbittern)
Pathway
ehs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104506317 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehs03019
]
104506317 (BARD1)
04121 Ubiquitin system [BR:
ehs04121
]
104506317 (BARD1)
03036 Chromosome and associated proteins [BR:
ehs03036
]
104506317 (BARD1)
03400 DNA repair and recombination proteins [BR:
ehs03400
]
104506317 (BARD1)
Messenger RNA biogenesis [BR:
ehs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
104506317 (BARD1)
Ubiquitin system [BR:
ehs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
104506317 (BARD1)
Chromosome and associated proteins [BR:
ehs03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
104506317 (BARD1)
DNA repair and recombination proteins [BR:
ehs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
104506317 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_4
Ank_2
Ank_5
Ank_3
zf-RING_6
BRCT
BRCT_2
NIBRIN_BRCT_II
ANK_LRRK2
Ank_KRIT1
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
104506317
NCBI-ProteinID:
XP_010145535
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
SCVGDCVGTECPVCHVPAWVQDAQINRQLDNMIQLCSKLRHLLGADTADSTEEKSTPNDS
DFGKKNKKEQIKMWFSPRSRKIRCVLNKSQPETKSSDLCQDTSSVYNFFPSPPHDKPSQP
TKKPTQRQSKKMQRKRLADINKVWSLEKPEQKGVEKTPKAKCVTICSQPVVLCTSEPNSP
XQESVKEADSSKNTENVEVKSSEKNENSEVVCPAQVSKENTCPTEVSLSIENGTTPLKRG
REQSDLPVASQSKRPRRTERTVPGKSGSQADRLEELPEGCSISPATEHKTSVQISSPVLK
FTDTVMKTRSSAVFQAMNSPSPSKFPSTPSTSKACNQVGIPHSPSVLKSSSGNTIARRNY
KGETLLHVASIKGDLAAVQELLKNGADPNVKDNAGWTPLHEACNHGHREVVELLLQYKAL
VNTTGYQNDSPLHDATRNGHVSVVELLLLHGASRDAVNIFGLRPVDYAESEKMKSVLMLP
VKNESFSLNQPPEALSPSQPRDGPLGILGSNLSSEQQKLLSKVATVLKARRCTEFNSRVT
HLVIPDVPMPSTVKCMMAILTGCWVLKFEWVQACLQTTVREQEEKYEIQGGPRRGRLNRE
QLLPNLFDGCYFYFLGSFSRHQKSDLVELVKAAGGQILVRQPKPDSDVTQTINTVAYHAE
STSDQRFCTQYVIYDVSSKFKPEKIRQGKVWMAPSSWLIDCVMSFQLLPVK
NT seq
2137 nt
NT seq
+upstream
nt +downstream
nt
atcgtgcgtgggcgactgcgttggcacggaatgcccggtgtgccacgtaccagcctgggt
gcaagatgcgcagatcaaccggcagctggacaacatgattcagctttgcagcaaactgcg
gcatctcctgggtgcggacaccgcagattcaacagaagagaagtccacaccaaatgactc
agactttggaaaaaaaaataagaaggaacagataaaaatgtggttcagcccaagaagtag
gaagattcgatgcgtcctgaacaagagtcagcctgagactaaaagcagtgacctttgtca
agacacatcttcagtttacaatttctttccttcccctcctcatgacaagccctcccagcc
gacaaaaaagccaacacagagacagagtaagaagatgcagaggaaacgtctagcagacat
taacaaagtgtggagcttagagaagcctgagcagaagggagttgagaagacgcccaaggc
gaagtgtgtgaccatctgcagtcaaccagtagtcctgtgcacttcggaaccaaacagccc
tnngcaggagtctgtaaaggaagctgactccagcaaaaatacagaaaatgtggaggtaaa
atcctcagagaagaacgagaacagtgaggtggtgtgccctgcacaagtcagcaaggaaaa
tacttgtcctacagaggtgtcgctgtcaatagaaaatggaactacgcctttaaaacgtgg
aagggagcagtccgatctgccagttgcttctcagtctaaaagacccaggaggactgagag
gaccgttcctgggaagtcgggcagtcaggcagatcgcttagaggagttacctgagggttg
ctccatctccccagcgactgaacacaagacatcagttcagatttcttcccctgtattgaa
attcactgacaccgtaatgaagacaagaagctctgcagtctttcaagcaatgaatagtcc
ttcaccttcaaagtttccctccaccccctctacttctaaggcttgtaatcaagtaggaat
accacacagtccctctgtgttgaagtcctccagtggtaacaccattgccagaagaaatta
caaaggagagactttgctccatgttgcttccatcaagggtgacctcgcagctgttcaaga
gctgctgaaaaacggggcagatcccaatgtcaaagataatgctggctggacgccactgca
cgaggcgtgtaatcatgggcacagagaagtggtggagctgttgctacaatacaaagcctt
agtgaataccacggggtaccagaacgactcgccgcttcacgatgccaccaggaacgggca
tgtgagcgttgttgagctgctgcttttgcacggcgcctcccgtgatgcagttaatatatt
tggtctgcggcctgtggactatgcagaaagtgaaaagatgaagtctgtgctaatgttacc
agtgaagaatgaatcgttttcccttaaccaaccccctgaggcactgagccccagccagcc
aagagatggacctcttggtatactggggagcaatcttagctcggagcaacagaaattgct
gagcaaagtggcaacagttctgaaggctcgaaggtgtactgaatttaacagcagagtaac
tcatcttgttatccctgatgttccaatgccgagtactgtcaaatgtatgatggctattct
gactggatgttgggtcctcaagtttgaatgggtacaagcctgtctacaaaccacagtacg
agagcaggaagagaagtacgaaatccaaggtggcccacgaagaggacggctcaacagaga
acagctgctgcctaacttgtttgatggatgctacttctattttctgggatctttcagccg
tcaccagaagagtgatcttgtggagctggtcaaagcagcaggaggacagattctggttag
gcagccaaaaccagacagcgacgtgacgcagacgatcaacacggtggcttaccacgcaga
atctacttctgaccagagattttgcactcagtatgtaatctatgatgtgtcttctaaatt
caagccagagaaaattcgtcagggcaaagtctggatggccccctccagctggctgataga
ctgcgtgatgtcatttcagctcctgcctgtcaagtaa
DBGET
integrated database retrieval system
