Eurypyga helias (sunbittern): 104506836
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Entry
104506836 CDS
T08356
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1
KO
K12828
splicing factor 3B subunit 1
Organism
ehs
Eurypyga helias (sunbittern)
Pathway
ehs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104506836 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ehs03041
]
104506836 (SF3B1)
03036 Chromosome and associated proteins [BR:
ehs03036
]
104506836 (SF3B1)
Spliceosome [BR:
ehs03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
104506836 (SF3B1)
Complex B
104506836 (SF3B1)
Complex C
U2 SnRNP specific factors
104506836 (SF3B1)
Chromosome and associated proteins [BR:
ehs03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104506836 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
TALPID3
Motif
Other DBs
NCBI-GeneID:
104506836
NCBI-ProteinID:
XP_010146225
LinkDB
All DBs
Position
Unknown
AA seq
1301 aa
AA seq
DB search
TSYFFVFTLDIEAQIREIQGKKPALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYPSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPQKIADREDEYKK
HRRMMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGEL
KVVNGAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAKGS
ETPGATPGSKIWDPTPSHTPAGAATPGRDTPGHATPGHGGATSSARKNRWDETPKTERDT
PGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPIGTP
AMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAGYVP
IRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLVDVD
ESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPT
LEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKA
AGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHT
GIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYGIES
FDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEE
MKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVELANK
VGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAFQEQ
TTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAVVMK
TCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTPI
LKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGY
IAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNV
QNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGFG
CEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKVRD
VYWKIYNSIYIGSQDALIAHYPRIYNDEKNTYIRYELDYIL
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
acctcatatttttttgtctttaccctagatatcgaagcacaaattcgagaaattcaagga
aaaaagcctgccctcgatgaagcacaaggagtaggccttgattccacaggatattatgat
caagagatttatggtggcagtgacagcaggtttgctggatatgtcacttctattgcagca
acagaattggaagatgatgatgatgactacccttctacaagtttgcttggccagaagaag
ccagggtatcatgctccagtggcattgcttaatgatataccacagtctaccgaacagtat
gatccttttgcagaacaccgtcctcaaaagattgcagatcgggaagatgagtacaaaaag
cacaggcggatgatgataatttccccagagcgtcttgatccttttgcagatggagggaag
acaccagatcctaaaatgaatgccagaacatacatggatgttatgcgtgaacagcattta
acgaaagaagagagggaaattaggcaacaactagctgaaaaagctaaagctggagagctt
aaagtcgttaatggagctgcatctcagccaccttcaaaacgcaaacggcgttgggatcag
acagcagatcagactcctggtgcgacacctaaaaaactgtccagttgggatcaagcagag
actcctggccatacaccatctctgcgatgggatgaaactccaggccgtgcaaagggtagc
gaaactcctggtgccacccccggctcaaaaatatgggatccgactcccagtcatacacca
gcgggcgctgcaacccccgggcgggacacgcctgggcatgcaacaccaggccatggaggt
gccacttccagcgcacgtaaaaatcgatgggatgaaacacctaaaacagaaagagatact
ccaggacatggcagcggatgggctgagacgcctcgtacagatagaggtggtgactccatt
ggtgagacaccaaccccaggagcaagtaaaagaaagtcacgatgggatgaaacacctgct
agccagatgggtggcagcactcctgttctgacacctggcaaaacacccatcggtacacca
gctatgaacatggcaactcccacaccaggtcatatcatgagcatgactcctgaacagctg
caggcttggcgttgggaaagggaaattgatgagagaaacagaccgctttctgatgaagaa
ttggatgctatgtttccagaaggatataaggttcttcccccaccagctggttacgtacct
attcgcactccagcccgtaagcttacagcaactccaacacctttgggtggtatgactgga
ttccacatgcagacggaagaccggactatgaagagtgttaatgaccagccatctggcaat
cttccattcctaaaaccagatgatatccagtactttgataaactcctggttgatgttgat
gaatcaactctgagtcctgaagaacagaaggagaggaaaataatgaaattacttctgaaa
ataaagaatggcacgcctcccatgagaaaggctgcattgcgacaaataactgataaagct
cgtgaatttggagcagggccgttgtttaatcagattctacctctgctgatgtcaccaacg
cttgaagatcaggagcgtcacttgcttgtcaaagtcattgacagaattctttacaaactg
gatgacttggttcgaccatatgtacacaagattcttgtcgttattgaaccactgctgatt
gatgaagactactatgctagagtggaaggcagagaaataatttcaaacctggctaaggct
gctggtttggcaacaatgatatccacaatgcgacctgatattgataatatggatgaatat
gtgcgaaatacaacagctcgagcctttgctgtcgttgcctctgctttgggcattccttct
ctgttgcccttcttgaaagctgtctgtaaaagcaaaaaatcctggcaggctaggcatact
ggcatcaagattgtgcagcagattgcgattcttatgggttgtgctatcttgcctcatctc
aggagcttggttgaaattattgaacatggtctggtggatgagcagcagaaagttcgcacc
atcagtgctttggctattgccgccttggctgaggcagctactccctatggtattgagtca
tttgattctgttctgaagcctttatggaagggtatacgtcagcacagaggaaagggtttg
gctgcctttttgaaggctattgggtacttgattccactcatggatgccgagtatgcaaac
tattataccagagaagtcatgctaatcctgatcagagagttccagtctcctgatgaagag
atgaagaaaattgtgttgaaggtagtgaagcagtgttgtggtacggatggtgttgaagca
aactacattaaaaccgagatcttgccaccttttttcaaacacttctggcaacacagaatg
gcattggacagaagaaattacagacagttggttgatacaactgtggagctggcaaataaa
gttggagcagcagaaattatttctagaattgtggatgatctgaaagatgaagctgagcag
tacagaaaaatggtcatggaaacaattgagaagataatgggaaatctgggggcagcagac
atcgatcacaaactggaagaacaacttattgatggtatcctgtacgcctttcaggaacag
accacagaggattctgtgatgctgaatggttttggcacagtggttaatgctctaggcaaa
agagttaaaccctacttgccacaaatctgtggtacagttttgtggcgtttgaacaacaaa
tcggctaaagttaggcagcaggccgctgacctgatctctcgtactgcagttgtcatgaag
acttgtcaagaggaaaaactgatgggccacttgggtgttgtgttgtatgagtacctgggt
gaagaataccctgaagtactgggcagcatactcggagcacttaaggctattgtgaatgtt
ataggtatgcacaagatgacgccccccattaaagatctgctgccacggcttacacctatt
ttgaagaacagacatgagaaagtacaggaaaattgcattgatcttgttgggcgcattgca
gaccgaggggcagaatatgtttctgcaagagaatggatgaggatctgctttgaactgctt
gaactgttaaaagctcacaagaaagctatccggagagccacagtgaacactttcggttat
atcgcaaaagctattggacctcatgatgtattggctacactgctgaacaacttgaaagta
caggaaaggcagaacagagtgtgtactacagtagcaattgctattgtagctgaaacgtgc
tcacctttcacagtgctgcctgcactcatgaacgaatacagagttccagaactgaatgtc
cagaatggtgtgttaaaatctctttctttcctgtttgaatacattggagagatgggaaaa
gactatatttatgctgttacaccgttgcttgaagatgctttgatggacagagatctcgta
cacagacagactgccagtgctgtggtgcaacatatgtctcttggtgtttatgggtttggc
tgtgaagattctcttaaccatttgttgaattacgtgtggcctaatgtgtttgaaacctct
cctcacgtcattcaggccgttatgggggccctggagggcctcagagttgctatcggtcca
tgcagaatgttgcagtattgtttacagggtttgtttcaccctgccaggaaagtcagagat
gtttattggaagatttataattcaatctacatcggatcacaagatgctctgatagcacat
tatccaaggatctataacgatgaaaagaacacctatattcgttatgaacttgattacatc
ttataa
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integrated database retrieval system
