Eurypyga helias (sunbittern): 104506935
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Entry
104506935 CDS
T08356
Symbol
LIG3
Name
(RefSeq) LOW QUALITY PROTEIN: DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
ehs
Eurypyga helias (sunbittern)
Pathway
ehs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104506935 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ehs03400
]
104506935 (LIG3)
Enzymes [BR:
ehs01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
104506935 (LIG3)
DNA repair and recombination proteins [BR:
ehs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
104506935 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
Synaptonemal_3
RNA_ligase
DUF3802
CDC45
Motif
Other DBs
NCBI-GeneID:
104506935
NCBI-ProteinID:
XP_010146368
LinkDB
All DBs
Position
Unknown
AA seq
903 aa
AA seq
DB search
MAEQRYCVDYAKRGTAGCKKCKEKIVKGMVRIGKIVPNPFTESGGDMKEWYHVKCMFEKL
EKARATTKKIEDITDLEGWEELQDGDKELINKHISEANSKAASTPKKKVIVQAKLTATGQ
ITTKDPLALITPSPKKFSGFTAKPKNSEDVSANSSHKSSLSAKNCDPKHKDCLLREFRKL
CAMVAEKPSYNVKTQIIQDFLKKGSGGDGFHGDVYLTIKLLLPGVIKIVYNLNDKQIVKL
FSRIFNCSQEEMVRDLEQGDVSETIRLFFEQSKSCPPAAKSALTIQEVDEFLIQLSKLTK
EDDQQSVLHGKVLRCTGNDLKCIIRLIKHDLKMNAGAKHVLDALDPNAYEAFKASRNLQD
VVERVLQNQQEAAKMPGMKRTLSVQASLMTPVQPMLAEACKSVEYAMKKCPNGMYAEIKY
DGERVQVHKNGDHFSYFSRSLKPVLPHKVAHFKDFIPKAFPGGQSMILDSEVLLIDNKTG
KPLPFGTLGVHKKAAFQDANVCLFVFDCIYFNDISLMDRPLCERRKFLHDNMVEIPXPDP
FLGDEARHKSFRSGRYDHRVIREGLEGLVLKDIKGNYEPGKRHWLKVKKDYLNEGAMADT
ADLVVLGAFYGQGSKGGMMSIFLMGCYDPKSEKWCTVTKCSGGHDDATLARLQTELDMVK
ISKDPSKIPKWLKINKIYYPDFIVPDPKKAPVWEITGAEFSKAEAHTADGISIRFPRCTR
IRDDKDWKTATNLQQLKELYQLSKEKADFNVVAGEEDESTAGSSGENEGNSRSSTPHSAA
KSPPSKSPAKAQKPEESKAVAASPQKSEEKRGEKRKASEMDDNGKKPLLDIFTGVRLYLS
PAVKDFDKLRRYFIAYDGDLVPEFDAASATHVIGDVDENPGAKRVSPNWIWECIRKRRLV
APC
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcagaggtactgcgtagactatgccaagcgtggcacagcaggctgcaagaag
tgcaaggagaagatcgtgaaaggaatggtgcgcattggcaagattgttcccaatcctttc
acggagtctggtggggacatgaaggagtggtaccacgtgaagtgcatgtttgagaagcta
gagaaggcccgggccaccaccaagaaaattgaagacatcacagacttggaagggtgggaa
gagctgcaagatggggacaaagaattaatcaacaagcacatctcagaagcgaattccaag
gctgcaagtacaccgaagaaaaaagtgatagtccaagctaagctcaccgccacaggacaa
ataaccacaaaagatccgttggcactcatcactccatcaccaaagaaattctctggcttc
acagccaagccaaagaattcggaagatgtctctgcaaactcttcccacaagtctagcctg
tctgcaaaaaactgtgatccgaagcacaaagactgcttgctgcgagagtttaggaagctc
tgtgccatggttgctgaaaagcctagctataacgtcaagacgcagatcatccaggatttc
ctgaagaagggatctggaggagatggttttcatggtgacgtatacctgaccattaagctg
ctgttaccaggtgtcattaaaattgtttacaacttgaatgataagcagattgtaaagctg
tttagtaggatttttaactgcagccaagaagaaatggtccgggacctggaacagggagat
gtttccgagaccatacgcctcttctttgaacagagcaagtcttgtcctccagcagccaaa
agtgccctgaccatccaagaggtggatgaattcctaatccagctatcaaagcttactaag
gaggatgaccagcaaagtgtgctgcatgggaaagtactcaggtgtacgggcaatgacctg
aaatgcatcatcaggctcattaagcatgacttgaaaatgaatgctggagcaaagcacgtg
ttggatgctttggatcctaacgcttacgaggcgttcaaagcatcacgcaacctccaggac
gtggtagagagagtcctgcagaaccagcaggaggctgcgaagatgcccgggatgaagcgc
accctcagcgtgcaggcctctctgatgaccccggttcagcccatgctggctgaagcctgc
aagtcagtagagtatgccatgaagaagtgcccaaatggcatgtatgcggagatcaaatac
gatggtgagcgggtgcaggtccataaaaacggggatcacttcagctacttcagcagaagc
ctcaagcctgtcctccctcacaaagtagcccattttaaggacttcatccccaaggctttc
cctgggggccagagtatgatcctggattcagaggttcttctcattgataacaaaaccggc
aagccgcttccttttgggactcttggtgtgcacaagaaagctgctttccaggatgccaac
gtttgcttgtttgtgtttgactgcatctatttcaatgacatcagcctgatggacaggcct
ctgtgtgaacgtcggaagtttctccacgataacatggttgaaatcccanaaccggatcct
tttctcggagatgaagcacgtcacaaaagcttcagatctggcagatatgatcaccgtgtc
atccgggagggactggaaggactggtgttgaaagatataaagggtaattatgaaccagga
aaacgacactggctgaaggtgaaaaaggactacctaaacgagggtgcgatggctgacacg
gcagacctggtggtgctgggagctttctatggacaaggcagtaagggtgggatgatgtcc
atctttctcatgggctgctacgatcccaagagtgagaagtggtgcaccgtgaccaagtgt
tccggtggccatgatgacgccaccttggcgcggctgcaaacagagctggatatggtgaag
atcagcaaggatcctagtaaaattccaaagtggctaaaaattaacaaaatctactaccca
gacttcattgtcccagatccaaagaaagctccagtgtgggagatcacaggggctgaattc
tctaaagctgaagcccacactgcagatgggatctccatccgcttccctcgctgcacccgc
attcgggatgacaaagactggaagacagccaccaacctccagcagctgaaggagctgtac
caactctccaaagagaaggctgatttcaatgttgttgccggggaggaagacgagtctaca
gctggcagcagcggagagaacgagggaaattccaggtcttccacgccacatagcgctgct
aaatctcccccaagcaagtcacctgcaaaagcccagaagccggaagagagcaaagcagtc
gctgcatccccccagaaatcggaggagaaacgaggggagaagagaaaagcgtccgagatg
gatgacaatggaaaaaagccgctgctggacatattcaccggcgtgaggctgtacctctcc
cccgccgtgaaggacttcgacaagctccggcggtacttcatcgcgtacgacggggatctc
gtgccggagttcgacgccgcctcggcaacgcatgttataggggacgttgatgagaatcct
ggtgctaagcgtgtgtctcccaactggatctgggagtgcatccggaagaggaggctggta
gccccatgctag
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