Eurypyga helias (sunbittern): 104508740
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Entry
104508740 CDS
T08356
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
ehs
Eurypyga helias (sunbittern)
Pathway
ehs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104508740 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehs03019
]
104508740 (CPSF2)
Messenger RNA biogenesis [BR:
ehs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104508740 (CPSF2)
U7-dependent histone pre-mRNA processing factors
104508740 (CPSF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
104508740
NCBI-ProteinID:
XP_010148765
UniProt:
A0A093IN29
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDENFTMDVIDSLRKHVHQVDAVLL
SHPDPLHLGALPYAVGKMGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYIQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHSLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDSKNSIILTYRTT
PGTLARFLIDNPSEKVIDIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDAEEDIDQPTVHKTKHDLMMKGEGNRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGEEPMDQDLSDVPTKCISATESMEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLVIVHGPPEASQDLAECCRAFGGKDIKVYVPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELREEEDLE
MQVDIPSSDSSVIAQQKAIKSLFGDDDKEMCEESEIIPTLEPLPPHEVLGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNLVAVRRTETGRIGLEGYLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgattatcaagttgaccacgctttcaggggtgcaggaggaatctgccctttgc
tatctgttgcaagtagatgaatttcgttttcttttggactgtggctgggatgaaaacttt
actatggatgttattgactctctgaggaaacatgtacaccaggttgatgctgttcttctt
tctcatcctgaccctctacaccttggtgctcttccatatgcagttggaaaaatggggttg
aattgtgccatttatgcaactattcctgtatataaaatgggacagatgtttatgtatgat
ctctatcagtcccgccataatactgaagatttcacactctttacattggatgatgtagat
gcagcctttgataagatacaacagctgaagttttctcagattgtgaacttgaaaggcaaa
ggacatggtttgtcaatcacaccactgccagctggccatatgataggaggcacaatttgg
aagattgtcaaggacggagaggaagaaatcgtttatgcagttgatttcaaccacaagagg
gagatccatctgaatggatgttccttggaaatgttgagcagaccttcgttgcttattaca
gattcatttaatgctacttacatacaaccgaggaggaagcaaagggatgaacagctgctg
actaatgttttggagacattacgtggtgatggaaacgtattaatagccgtggatacagca
ggcagagttctggaacttgctcaacttcttgatcagatctggagaacaaaagatgcagga
ttaggagtctactctctagcacttttgaataacgtcagctacaatgtagtggagttctct
aaatcacaggttgaatggatgagtgacaagttgatgaggtgctttgaagacaagagaaac
aatccttttcagttccgccatctctccttatgtcatagtctgtctgatctggctcgagtg
cctagtccaaaagtcgttcttgccagtcaacctgacttagagtgtggattttctagagat
cttttcattcagtggtgccaggattccaaaaactctataattttaacttaccgcactaca
cctggaacattagcgcgcttcctgattgataatccttctgaaaaagttatagatattgag
ttgagaaaacgtgtcaagttggaaggaaaagaacttgaagaatacctagaaaaggagaaa
ctaaagaaagaagcagccaagaagttagaacagtctaaagaggcagatattgattctagt
gacgagagtgatgctgaagaggatattgatcagccaactgtacataagaccaaacatgat
ttgatgatgaaaggtgaaggtaaccggaaaggaagcttcttcaaacaggcaaagaaatct
tatcccatgtttccagcccctgaagaaagaattaaatgggatgaatatggcgagattatc
aaacctgaggattttctagttccagaacttcaagcaacagaagaagaaaaaagcaaatta
gaatctggtttgacaaatggagaagagcctatggaccaggatttatcagatgttcctacc
aaatgtatttctgcaacagaatccatggaaattaaagccagagttacatacattgactat
gaaggacgctcagatggggactcaattaaaaaaatcattaatcaaatgaaaccaagacaa
ctggtcattgtccatggaccacctgaggccagtcaggaccttgcagaatgttgcagagct
tttggtggaaaagacattaaagtttatgtgccaaaactgcatgaaactgtagatgcaacc
agcgaaactcacatttaccaggtcaggttaaaagattctcttgtcagctcccttcagttc
tgcaaagccaaggatgccgagttggcttggatagatggtgtcctggacatgcgggtttca
aaagtggatactggagttattttggaagagggagagctgagggaagaagaagacttagag
atgcaagtggatataccttcttcagactctagtgtcattgcacaacagaaggccatcaaa
agcctcttcggtgatgatgacaaggagatgtgtgaggagagcgagatcattcctactttg
gaacctctgccacctcatgaggttctcggacatcagtctgtgtttatgaatgagccaaga
ctgtctgacttcaagcaagttctcttgcgagaaggtatacaagctgaatttgtaggaggc
gtgctcgtgtgcaacaatctggtggctgttcgcaggactgaaacagggcgcattggattg
gaaggctatctctgtcaggacttctataggataagagaccttttatacgagcaatacgct
attgtctaa
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