Eurypyga helias (sunbittern): 104508822
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Entry
104508822 CDS
T08356
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
ehs
Eurypyga helias (sunbittern)
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ehs03041
]
104508822 (DDX20)
Enzymes [BR:
ehs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104508822 (DDX20)
Spliceosome [BR:
ehs03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
104508822 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SiaC
AAA_22
AAA_19
AAA_30
CMS1
Motif
Other DBs
NCBI-GeneID:
104508822
NCBI-ProteinID:
XP_010148866
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
PDLIVQAKSGTGKTCVFSTIALDAVLLESPATQILILAPTREIAVQIHAVITTIGIKMDG
LECHVFIGGTPLNQDKIRLKKCHIAVGSPGRIKQLIELDYLNTASIRLFILDEADKLLEE
GSFQEQINWIYSSLPTNKQMLAVSATYPESLANALTRYMREPTFVRLNPTDPSLIGLKQY
YKIVNCHPLPHKTFEEKTQHLQELFSKIPFNQALVFSNLHSRAQHLAEILTARGFTAECI
SGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVINLDVPVDWETYMHRIGR
AGRFGTLGLSVTYCCRGEEENTMMKIAQKCNLQLLPLPEPIPPGMMVQFEGGEVEVKPVT
HKGASVNSDTVCLRPEQPALQPVQNSFAEVPRAHTNLPGDNSSVERPKKALKQKQRKCTS
SANTEEGSRNRQTSNCHKEQRSRVKTVSRSDEQHNTPSPDEEALKKNLPRIPCLSSFKTY
QNNPWSFSEFVEDYEYFIKEGLEREVEVFRSYSGPDDDRELPRNGDVAWKEVEHNPEVVA
NSGVSGESDGPYSSRASSSSRENNSCFEAFSDTQEDAVPTVCQGYAGSCPTPEKPQELAQ
APKQNPVKKKVQKQNANQKKSCYHQFPGPSTRKTEDDCSCSSWGDGVPDEALSFKNYWES
YCQAWHSYYTAVSRYQKRCRQLDWLNAYHANSVYLQELLKSSD
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
ccagatctcatcgtgcaggccaagtctggcactggcaaaacctgcgtgttctccactatc
gccctggacgcggtgctgctggagagtcccgccacgcagattctgatcttggctcccacg
cgtgagattgctgtgcagattcatgctgtcatcacaacgattggaataaaaatggatggc
ttggaatgccacgtgttcattggagggactcctctgaaccaggacaaaatcaggctaaag
aagtgccacatagcagttggctccccaggtcgaataaaacagctcatagagttggactac
ttgaatacggccagtatccggcttttcattcttgatgaagcagacaagcttctagaagaa
ggcagctttcaggaacaaatcaattggatttactcttcgctaccaaccaataaacagatg
cttgctgtttcagctacttaccctgaatccttagctaatgctttgacccgatacatgaga
gagccaacatttgtgaggttgaaccccactgatccaagtctcattggtctgaagcagtat
tacaaaatcgtgaattgccatccgctgccccataaaacatttgaggagaaaacccagcac
ctacaggagctgttcagcaagattccatttaatcaagccttagtcttctcaaacttgcat
agcagggcgcaacatctagctgaaatactgacagccaggggctttactgctgagtgcatt
tcggggaacatgaatcaaaatcaacgacttgacgctatggctaaattaaagcagttccac
tgcagagttctcatctccacagacttgacatctcgtggaatcgatgctgaaaaagtgaac
ctggttatcaacctggacgtgccggtagactgggaaacgtacatgcaccgcatcggcaga
gctgggcgctttggaactctaggcttatctgtgacatactgctgccgcggagaggaagaa
aacacaatgatgaaaattgctcagaaatgtaatcttcagcttcttcctctaccagagccc
atacctcctggaatgatggttcagtttgaaggtggggaggtagaagtcaaaccagttaca
cataaaggtgcttcggtgaattctgacaccgtgtgtcttagaccagagcagccagcacta
cagcctgtccagaacagttttgcagaggtaccacgggctcatactaatcttccaggtgat
aattcctctgtggaaaggccaaaaaaggctctgaagcaaaagcagaggaagtgcacgagt
tctgcaaatacagaagaaggtagtagaaaccgccaaacttccaattgccacaaagaacag
aggagtagagtcaaaactgtctccagatctgatgaacagcataacactccatctccagat
gaggaggccttaaaaaaaaatcttcccaggattccatgcttgtcatctttcaaaacctat
cagaacaatccctggagcttctcagagtttgttgaagactatgagtatttcattaaagaa
gggctggagagagaggtggaagttttcagaagctattcaggcccagatgacgaccgtgag
ctgcccagaaatggtgatgtagcatggaaggaggtggaacataatccagaggtggtagca
aacagtggtgtgtctggtgagagcgatgggccgtacagttccagggcttcctccagcagc
agggagaacaactcttgctttgaggcattttcagatacgcaggaggatgccgttcccaca
gtgtgccaaggttacgcaggctcctgtcccacaccagagaagcctcaggagctggcacaa
gcccccaagcaaaatccagtgaaaaagaaagttcagaaacagaatgctaaccaaaagaaa
agctgttaccatcaattccctggtccttccaccagaaaaactgaagacgactgctcctgc
agctcttggggtgatggtgttccggatgaggctctgagtttcaaaaactactgggaatct
tactgccaagcatggcacagctactacacagccgtgtcgcgctatcagaagaggtgcaga
cagttggactggctgaacgcctaccacgccaactccgtctaccttcaggagctgctgaaa
agcagtgattga
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