Eurypyga helias (sunbittern): 104510039
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Entry
104510039 CDS
T08356
Symbol
COL4A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
ehs
Eurypyga helias (sunbittern)
Pathway
ehs04510
Focal adhesion
ehs04512
ECM-receptor interaction
ehs04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104510039 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104510039 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104510039 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ehs04147
]
104510039 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
ehs00536
]
104510039 (COL4A1)
Exosome [BR:
ehs04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104510039 (COL4A1)
Glycosaminoglycan binding proteins [BR:
ehs00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104510039 (COL4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104510039
NCBI-ProteinID:
XP_010150471
LinkDB
All DBs
Position
Unknown
AA seq
1629 aa
AA seq
DB search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NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
ggagaaagaggcttgccgggactacagggtgtgattgggtttcctggaatgcaaggacct
gaaggtcctcctggcccaccagggcttaagggtgatactggagaaccagggctgccagga
acaaagggaacaagaggccccccaggagcatcaggctttccaggaaacccaggccttcct
gtatgaaaaaatggccctcctggtccacctggaattccagggtgtaatggcacaaagggt
gaaagaggtccagtaggtcccccaggtttaccaggactgactgggagcataggaccccca
ggacctcctggaatgaagggagatccaggtgaagtcattggtcttttacctcctagtgtg
ctaaaaggtgataaaggctttcctggccaacctggactacctggtccacctggaactcca
gggtttcagggaccaatggggccacaggggcctccaggagaaccaggtcccccagggcca
ccaggactcccaggcgagaagggctacatgggcttgggctttcagggtcccaaaggtgaa
aagggagaacaaggggtaaggggtcccccaggaccaccaggaccatcaccacatgtgaaa
gaaaaaggcactgaagtcataaagggagaaaagggtgatccaggttacaagggtgaacca
ggagccccaggatatccaggttcaggtttcaaaggagaaaagggtgaacctgggaagcct
ggcccacgtggaaagcctggaaaagatggtgaaccaggaccaaaaggagatcccggtttg
cctggtgggtttgggattccaggacgacctggggaacctggtttgaagggtgacaaaggt
gaacgaggttttccaggacctccaggaagagttatagatcctggaccaatagataccttt
ggtgaaaaaggagagcctggagtttcaggtttgcctggactgaaaggtcaaaaaggtgaa
aaaggtttccctggtatacaaggaatcccaggacctccaggtcagccactgccagacagg
gtaggatctcctggtgtccctggacagagaggtgaaaaaggtgaaaagggttctccggga
ttccctttgcctggaccccctggaagagatggcttccctggtcctccggggttgcctggc
cctccaggtcctccaggcaaaacagatggaattgatcaatgccagcagggagaacctggt
gcaccaggtagtcctggacctccaggaagagatggatttccaggagagatgggagagaaa
ggtgacaaaggggagtcctgtgccttatgtgataaagtaggacctcctggacttccagga
ccacaagggccaccaggtccagcaggttttccaggacaatcaggtttcaagggtgacaga
ggtttacctggacttgatggccttccaggcgtacctggcccccccggcactccaggactt
atgggcagccctggggcaaaaggagaaccaggagatttcacttatgattctatcctgaaa
ggtgaaaagggagatcctggtttcccaggacaaccaggtattcctggaagagaaggaaga
ccaggaaaagatggattgccaggtgcccagggtccaaaaggagcatcgggtacagttggt
ttgaaaggagaacgtggtccccctggccaacctggattccctggagtacgtggtgaaaga
ggttttcctggccctcctgggataggtgctgcaggcttacctggtgacaaaggagacaga
ggctttgctggaaccccaggtttaccaggtcttccaggagcaaagggtgaagcaggacga
actgtatcactccctggacctcctggggcagatggccttcctgggccacctggtttccct
ggaccccaaggtgacaaagggaatcctgggcttccaggtagacccggcctgccaggagaa
aaaggtgctgttgggcagccaggtatagggttccctggacctccaggacccaaaggtttc
cagggtcagcctggctcgcctggtctgccggggaatccgggaacccctggcctggatggt
ttgccaggtgtaccaggtttacaaggtcaaaaaggtgaacctggtgtaggtctccctggc
cctaagggattgccaggccccccaggcccagctggcatccctggagaaaagggaaatcca
ggactgcctggcttacgtggcgagcaaggctttccgggcatacctgggcagcaaggattc
agaggtgaccccggtctcccaggactgcaaggcttgcagggccctccgggtgcaccgggc
cttggcccgcagggatcaccggggccctctgggcagccgggaccccagggaccgccagga
tttcctggaataaaaggagaaaggggcttccctggtatcccaggtctagatatgccagga
ccaaaaggggataaaggtagccagggccagcctggagtaccagggtctgtgggattacct
ggcctgccaggccctcaaggggccattggactgaaaggatcgtcaggagccaaaggagaa
atgggagttatgggaactcctggattgccaggaactcctggaccagttggagatcgagga
tttcctggtgataaaggtagcccaggttttaaaggtgtagttggaccacagggtgatccc
ggtgtcaaaggagataaaggtgaagccggtctcccaggaaaacctggaacgatggacaac
atggacatggttagtctcaaaggccaaaagggagatcaaggagaaaaaggggaccatgga
gccgcaggagaaaaaggattacgtggggattatggagaaccaggaatcccagggaaggat
ggtgaacctggtactccaggacatccaggtccaaaaggtgatcagggccccccaggatac
ccgggagatccaggaattccaggacaaaaaggatccgtcggtgaaatgggtttgccagga
acacctggagaaaaaggtctgccaggagtaccaggttcaccaggcacaccagggttccct
gggcaaaaaggtgaaaaaggagacaaaggagcaccaggttttcctggagttggcattcca
gggtctcctggtgagaagggagaaccaggaagaacgggtagtccaggtttatctggaaat
aagggcgaaaagggcagtgcaggaattcctggaatgccgggtgcccccggtcccaaagga
tcccctggcatggcaggatttccaggcaatcccggcccccatggagcaaagggtgaaaaa
gggcttcctggcttaagtggcattccaggtttaaaaggagaaccaggtgaacctggtgtt
ccgggtcctgctggttccattggacagaagggtgaaccaggttatgatgggattccaggt
gcagctggtgcaaagggtgaacaaggtattcccggtagaggacttccaggatttcctggt
gcaaagggggataaaggtgcgaaaggtgaagtgggtttcccaggatccccaggaagccca
ggcatcccaggcctgaaaggagaaccaggatatgctggtccaccaggccctaagggcagc
caaggtcttcctggactgccgggaagtgcaattgagggccctaaaggagacagaggaccc
caaggccaacctggccttccaggtttaccaggtccaacagggccaccaggacccccaggt
ctgaaagggaccaaaggagagcaaggggtcaatggctggcctggctctcctggcagtccg
ggagtcaaaggtgatccgggtttccagggactgccaggtggtcctggtttaccaggagat
attggtcaaaagggtgatctgggaccaccaggagttccaggcattccaggtccaaaagga
tctcctggctttccaggccttaagggtgagcgaggtgaccaaggtcttcctggatctaaa
ggtttgcaaggcctaccaggcccaccaggtgcttttcagcttgttaaaggggatcctggc
ttacctggccctgtaggaccagttggtctgaaaggattcccaggacttccaggtcccaaa
ggacagcaaggggtgacaggaccttcaggtgtacctggaccacctggtagtccagggttt
gatggtaaacctgggcaaaaaggagaagttggtccttacggtcccccaggacccagagga
ttccctggtccacctggccctgaaggtttgcctggggctatgggtccaccaggttcacca
tctgttgctcacggcttcctggttaccagacacagtcaaaccaccgaagaaccaacgtgt
ccatttggaacaaggctgatttaccatggctactccttgctttatgtacaaggcaatgaa
agagcacatggccaagatctgggcacggcaggaagctgtcttcgtaaatttagtaccatg
cctttcttattctgcaatatcaacaacgtatgtaactttgcatcaaggaatgactattcc
tactggctgtccactcctgaacccatgccaatgagtatggctccgatcactggtgataat
atcagacccttcatcagcagatgctcggtgtgtgaagcccctgcgatggtaatagctgtt
cacagtcaaacaattcaaataccaccgtgtcctgaaggctggagttcactttggattggc
tactcttttgtcatgcacaccagtgctggtgcagagggctctggccaggccctggcgtct
cctggttcctgcctagaggaatttcgcagcgctcccttcattgaatgccatggccggggc
acctgcaattattatgcaaatgcttacagcttctggcttgccactatagagaggaatgag
atgttcaagaaaccgactccctcaactttgaaagcaggggatctgcgctccaacgttagc
cgttgtcaagtctgtatgaggaaaacataa
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integrated database retrieval system
