Eurypyga helias (sunbittern): 104510039
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Entry
104510039 CDS
T08356
Symbol
COL4A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
ehs
Eurypyga helias (sunbittern)
Pathway
ehs04382
Cornified envelope formation
ehs04510
Focal adhesion
ehs04512
ECM-receptor interaction
ehs04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104510039 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104510039 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104510039 (COL4A1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104510039 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ehs04147
]
104510039 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
ehs00536
]
104510039 (COL4A1)
Exosome [BR:
ehs04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104510039 (COL4A1)
Glycosaminoglycan binding proteins [BR:
ehs00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104510039 (COL4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104510039
NCBI-ProteinID:
XP_010150471
LinkDB
All DBs
Position
Unknown
AA seq
1629 aa
AA seq
DB search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NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
ggagaaagaggcttgccgggactacagggtgtgattgggtttcctggaatgcaaggacct
gaaggtcctcctggcccaccagggcttaagggtgatactggagaaccagggctgccagga
acaaagggaacaagaggccccccaggagcatcaggctttccaggaaacccaggccttcct
gtatgaaaaaatggccctcctggtccacctggaattccagggtgtaatggcacaaagggt
gaaagaggtccagtaggtcccccaggtttaccaggactgactgggagcataggaccccca
ggacctcctggaatgaagggagatccaggtgaagtcattggtcttttacctcctagtgtg
ctaaaaggtgataaaggctttcctggccaacctggactacctggtccacctggaactcca
gggtttcagggaccaatggggccacaggggcctccaggagaaccaggtcccccagggcca
ccaggactcccaggcgagaagggctacatgggcttgggctttcagggtcccaaaggtgaa
aagggagaacaaggggtaaggggtcccccaggaccaccaggaccatcaccacatgtgaaa
gaaaaaggcactgaagtcataaagggagaaaagggtgatccaggttacaagggtgaacca
ggagccccaggatatccaggttcaggtttcaaaggagaaaagggtgaacctgggaagcct
ggcccacgtggaaagcctggaaaagatggtgaaccaggaccaaaaggagatcccggtttg
cctggtgggtttgggattccaggacgacctggggaacctggtttgaagggtgacaaaggt
gaacgaggttttccaggacctccaggaagagttatagatcctggaccaatagataccttt
ggtgaaaaaggagagcctggagtttcaggtttgcctggactgaaaggtcaaaaaggtgaa
aaaggtttccctggtatacaaggaatcccaggacctccaggtcagccactgccagacagg
gtaggatctcctggtgtccctggacagagaggtgaaaaaggtgaaaagggttctccggga
ttccctttgcctggaccccctggaagagatggcttccctggtcctccggggttgcctggc
cctccaggtcctccaggcaaaacagatggaattgatcaatgccagcagggagaacctggt
gcaccaggtagtcctggacctccaggaagagatggatttccaggagagatgggagagaaa
ggtgacaaaggggagtcctgtgccttatgtgataaagtaggacctcctggacttccagga
ccacaagggccaccaggtccagcaggttttccaggacaatcaggtttcaagggtgacaga
ggtttacctggacttgatggccttccaggcgtacctggcccccccggcactccaggactt
atgggcagccctggggcaaaaggagaaccaggagatttcacttatgattctatcctgaaa
ggtgaaaagggagatcctggtttcccaggacaaccaggtattcctggaagagaaggaaga
ccaggaaaagatggattgccaggtgcccagggtccaaaaggagcatcgggtacagttggt
ttgaaaggagaacgtggtccccctggccaacctggattccctggagtacgtggtgaaaga
ggttttcctggccctcctgggataggtgctgcaggcttacctggtgacaaaggagacaga
ggctttgctggaaccccaggtttaccaggtcttccaggagcaaagggtgaagcaggacga
actgtatcactccctggacctcctggggcagatggccttcctgggccacctggtttccct
ggaccccaaggtgacaaagggaatcctgggcttccaggtagacccggcctgccaggagaa
aaaggtgctgttgggcagccaggtatagggttccctggacctccaggacccaaaggtttc
cagggtcagcctggctcgcctggtctgccggggaatccgggaacccctggcctggatggt
ttgccaggtgtaccaggtttacaaggtcaaaaaggtgaacctggtgtaggtctccctggc
cctaagggattgccaggccccccaggcccagctggcatccctggagaaaagggaaatcca
ggactgcctggcttacgtggcgagcaaggctttccgggcatacctgggcagcaaggattc
agaggtgaccccggtctcccaggactgcaaggcttgcagggccctccgggtgcaccgggc
cttggcccgcagggatcaccggggccctctgggcagccgggaccccagggaccgccagga
tttcctggaataaaaggagaaaggggcttccctggtatcccaggtctagatatgccagga
ccaaaaggggataaaggtagccagggccagcctggagtaccagggtctgtgggattacct
ggcctgccaggccctcaaggggccattggactgaaaggatcgtcaggagccaaaggagaa
atgggagttatgggaactcctggattgccaggaactcctggaccagttggagatcgagga
tttcctggtgataaaggtagcccaggttttaaaggtgtagttggaccacagggtgatccc
ggtgtcaaaggagataaaggtgaagccggtctcccaggaaaacctggaacgatggacaac
atggacatggttagtctcaaaggccaaaagggagatcaaggagaaaaaggggaccatgga
gccgcaggagaaaaaggattacgtggggattatggagaaccaggaatcccagggaaggat
ggtgaacctggtactccaggacatccaggtccaaaaggtgatcagggccccccaggatac
ccgggagatccaggaattccaggacaaaaaggatccgtcggtgaaatgggtttgccagga
acacctggagaaaaaggtctgccaggagtaccaggttcaccaggcacaccagggttccct
gggcaaaaaggtgaaaaaggagacaaaggagcaccaggttttcctggagttggcattcca
gggtctcctggtgagaagggagaaccaggaagaacgggtagtccaggtttatctggaaat
aagggcgaaaagggcagtgcaggaattcctggaatgccgggtgcccccggtcccaaagga
tcccctggcatggcaggatttccaggcaatcccggcccccatggagcaaagggtgaaaaa
gggcttcctggcttaagtggcattccaggtttaaaaggagaaccaggtgaacctggtgtt
ccgggtcctgctggttccattggacagaagggtgaaccaggttatgatgggattccaggt
gcagctggtgcaaagggtgaacaaggtattcccggtagaggacttccaggatttcctggt
gcaaagggggataaaggtgcgaaaggtgaagtgggtttcccaggatccccaggaagccca
ggcatcccaggcctgaaaggagaaccaggatatgctggtccaccaggccctaagggcagc
caaggtcttcctggactgccgggaagtgcaattgagggccctaaaggagacagaggaccc
caaggccaacctggccttccaggtttaccaggtccaacagggccaccaggacccccaggt
ctgaaagggaccaaaggagagcaaggggtcaatggctggcctggctctcctggcagtccg
ggagtcaaaggtgatccgggtttccagggactgccaggtggtcctggtttaccaggagat
attggtcaaaagggtgatctgggaccaccaggagttccaggcattccaggtccaaaagga
tctcctggctttccaggccttaagggtgagcgaggtgaccaaggtcttcctggatctaaa
ggtttgcaaggcctaccaggcccaccaggtgcttttcagcttgttaaaggggatcctggc
ttacctggccctgtaggaccagttggtctgaaaggattcccaggacttccaggtcccaaa
ggacagcaaggggtgacaggaccttcaggtgtacctggaccacctggtagtccagggttt
gatggtaaacctgggcaaaaaggagaagttggtccttacggtcccccaggacccagagga
ttccctggtccacctggccctgaaggtttgcctggggctatgggtccaccaggttcacca
tctgttgctcacggcttcctggttaccagacacagtcaaaccaccgaagaaccaacgtgt
ccatttggaacaaggctgatttaccatggctactccttgctttatgtacaaggcaatgaa
agagcacatggccaagatctgggcacggcaggaagctgtcttcgtaaatttagtaccatg
cctttcttattctgcaatatcaacaacgtatgtaactttgcatcaaggaatgactattcc
tactggctgtccactcctgaacccatgccaatgagtatggctccgatcactggtgataat
atcagacccttcatcagcagatgctcggtgtgtgaagcccctgcgatggtaatagctgtt
cacagtcaaacaattcaaataccaccgtgtcctgaaggctggagttcactttggattggc
tactcttttgtcatgcacaccagtgctggtgcagagggctctggccaggccctggcgtct
cctggttcctgcctagaggaatttcgcagcgctcccttcattgaatgccatggccggggc
acctgcaattattatgcaaatgcttacagcttctggcttgccactatagagaggaatgag
atgttcaagaaaccgactccctcaactttgaaagcaggggatctgcgctccaacgttagc
cgttgtcaagtctgtatgaggaaaacataa
DBGET
integrated database retrieval system
