Eurypyga helias (sunbittern): 104510418
Help
Entry
104510418 CDS
T08356
Symbol
DHX38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X1
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
ehs
Eurypyga helias (sunbittern)
Pathway
ehs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104510418 (DHX38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ehs03041
]
104510418 (DHX38)
Enzymes [BR:
ehs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104510418 (DHX38)
Spliceosome [BR:
ehs03041
]
Complex C
Other components
Step II factors
104510418 (DHX38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
WHD_HA2
AAA_22
AAA_19
nSTAND3
Flavi_DEAD
T2SSE
nSTAND_NTPase5
Microtub_bd
PhoH
SRP54
Sigma54_activ_2
AAA_30
AAA_16
Toxin_trans_Wo
AAA_7
MRP-S31
Motif
Other DBs
NCBI-GeneID:
104510418
NCBI-ProteinID:
XP_010150960
LinkDB
All DBs
Position
Unknown
AA seq
846 aa
AA seq
DB search
MLTSGVVHRIEVDEDFEEDNSAKVHLLVHNLVPPFLDGRIVFTKQPEPVIPVKDATSDLA
IIARKGSQLVRKHREQKERKRAQHKHWELAGTKLGDIMGIKKEEEKDELLTEDGKVDYKT
EQKFAEHMKEKSQASSEFAKKKSILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGK
TTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSE
NTVIKYMTDGILLRESLREADLDNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLV
VTSATMDADKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQVHLSGAPG
DILIFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKC
IVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRAGRAGRTG
PGHCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNML
NSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVP
AIFYRPKGREEESDQVREKFAVPESDHLTYLNVYLQWKNNSFSTLWCNQHFIHAKAMRKV
REVRAQLKDIMVQQRMSLASCGTDWDVVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHL
HPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGKSSQEN
RRRAKEEVSAMEEEMALAEEQLRARREEQERRNPLGSARSTKIYTPGRKEQGEPLTPRRT
PARFGL
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccagcggggtggttcaccgcattgaagtggacgaagattttgaggaggataac
tcggccaaagtgcatctcttggtgcacaacctggtgccccctttcctagatggaaggatt
gtcttcaccaagcagccggagccagtcatccctgtcaaggatgccacctcagatttggcc
atcatagcccggaaaggcagccagttggtgcgcaagcacagggagcagaaggagcgtaag
agggctcagcataagcactgggagctggcaggcacaaaactgggagacattatggggatc
aagaaggaggaagagaaggacgagttgctgacagaagatggcaaagtggattacaagact
gagcagaagtttgctgaacacatgaaagaaaaaagtcaagccagcagcgagtttgccaag
aagaaatcgatcctggagcagaggcaatatctgcccatctttgctgtgcagcaggagctg
ctctccatcctcagagacaacagcattgtgatcgtagtgggggagacggggagtgggaag
acgacccagctgacacagtacctccatgaggacggctacaccgactacggcatgattggc
tgcacccagccccggcgagtggcggccatgtcggtcgccaagcgggtcagcgaagagatg
ggggtgcgcctgggagaggaggtgggctatgccatccgctttgaggactgcacgtccgag
aacaccgtgatcaaatacatgacggatgggatcctcctgcgtgagtccctgcgcgaggct
gacctggacaactacagcgctatcatcatggacgaggcacacgagcgctcgctcaatact
gacgtgctctttggcctgcttcgggaggtggtggcccggcgctcagatctgaagcttgtt
gtcacttcggccaccatggatgcagataaatttgcctccttctttgggaacgttcctatt
ttccacattcctgggcgcactttccccgttgatattcttttcagcaagactccacaggag
gattatgtggaagctgcagtgaaacaagccctgcaggtccatttgtctggtgctcctggg
gacatcctcatcttcatgcctggccaggaggacatcgaggtgacctcagagcaaattgtg
gagcaccttgaggagctggagaaggcgcctgctcttgctgtactgcctatctattctcag
ctaccatcggacttgcaggccaagatcttccagaaggctccggatggggtcaggaagtgc
attgttgccacaaacattgcggagacctcgctgacggtggacggcatcatgtttgtgatt
gactctggctactgcaagttgaaggttttcaacccccgtataggcatggatgcgctgcag
atctacccgatcagccaagccaatgccaaccagagggcaggccgagctggccgaacaggt
ccaggccactgcttcaggctctacacccagagtgcctacaagaacgaactgctgacaacc
acggtccccgagatccagcgcaccaacctggccaacgtcgtgcttttgctcaagtccctg
ggtgtgcaggacctgctgcagttccacttcatggatccgccccctgaggacaacatgctg
aactctatgtaccagctctggatcctgggggccctggataacacaggtggtctgacctca
acaggacgcctcatggtggagttcccactggatcctgcgctctccaaaatgctcatcgtc
tcctgcgacatgggttgcagctctgagatcttgctcattgtctccatgttgtctgtgccc
gccatcttttaccggcctaagggccgagaggaggagagtgaccaagtgcgggagaaattc
gctgttccagagagcgatcacctgacttacctgaacgtttacctgcagtggaagaacaac
agcttttctacgctgtggtgcaaccagcacttcatccatgccaaggccatgcggaaggtg
cgggaggtgcgtgcccagctgaaggacatcatggtgcagcagcggatgagcctggcgtcc
tgcggtaccgactgggatgttgtcaggaagtgcatctgtgccgcgtatttccaccaagcc
gcaaagctgaagggcatcggggagtatgtcaacatccgcacgggcatgccctgccacctg
caccccaccagctcgctgtttggcatgggctacacgccggactacattgtgtatcatgag
ttggtcatgaccaccaaggaatacatgcagtgtgtcactgctgtggatggagagtggctg
gcggagctgggccccatgttctacagcatcaaacatgctggcaagtcaagccaggagaac
cgccgccgcgccaaggaggaagtgtctgccatggaggaagagatggccttggctgaggag
cagctgcgtgcccgacgggaggagcaggagcgccgtaacccactgggcagtgcgaggtct
actaaaatctacacccctgggcggaaggagcagggagagcccctgacgccacgacgcacc
ccagcccgcttcggcctctga
DBGET
integrated database retrieval system
