Eurypyga helias (sunbittern): 104511753
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Entry
104511753 CDS
T08356
Symbol
SOX13
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-13
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
ehs
Eurypyga helias (sunbittern)
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ehs03000
]
104511753 (SOX13)
Transcription factors [BR:
ehs03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104511753 (SOX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
104511753
NCBI-ProteinID:
XP_010152790
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All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MSMRSPVSPHLELDGAGSMVNCTIKTEEKKEGSYESPPGAAPSTEPRPSDPSSDPPGPPP
MEGTDPQAAPQESRSPAGDALEPRCSAFEPAGSGQEKLDFNRNLKEVMPTIEKLLSSDWK
ERLLGRNTAESKEVKGTQESLAEKELQLLVMINQLSTLRDQLLTAHSEQKNRAAMLFEKQ
QQQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFTPSHQPLPVTPD
SQLALPIQPIPCKPVDYPVQLLHSXXXXXXXXXXXXXXPAGSGHLQMQETSQPLNLTAKP
KGSDLPSAXCQSLAPSHRAARDLQTSPSNLPLGFLGEGDAITKAIQDARQLLHGHSGAME
GSLSSPYRKDHGGIDSSPVKERMEESPAHRLDEALLTCEMDGSRHFPESRNNNHIKRPMN
AFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQHLEKYP
DYKYKPRPKRTCIVEGKRLRVGEYKALMRNRRQDARQGYLIGPQGSQMPPASSDVLYQRP
VGMQLTPPLMEHYLPRSMDPGMPVIVNTRSLKDGDGGDDRHSVADGEMYRYSEEEDSEGE
DKSDGELVVLTD
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaggagccccgtttctccccacctggagctcgatggagcaggcagcatggtg
aactgcaccatcaagacagaggagaagaaggagggcagctacgagtcccccccgggggct
gcccccagcaccgagccccgtcccagcgacccctccagcgaccccccaggaccaccaccg
atggagggcaccgacccccaggccgcgccgcaggagtcccgctcgcccgccggcgatgcg
ctggagcccaggtgctctgcctttgagccggccggcagcggccaggagaagctggacttc
aacaggaacctgaaggaagtgatgccgaccatcgagaagttactgtccagcgactggaag
gagcggctgctgggccgaaacaccgctgagtccaaggaagtgaaaggaacccaggaaagc
ctggcagagaaggagctccagttactcgtcatgatcaaccagctctccacgctgcgggac
cagctcctgacggcgcactcggagcagaagaacagggcagccatgctctttgagaagcag
cagcagcagatggagctggcacggcagcagcaggagcagatcgccaagcagcagcagcag
ctcatccagcagcagcacaaaatcaacttgctgcagcaacagatccagcaggtcaacatg
ccctacgtcatgattcctgccttcacccccagccaccagcccctccccgtcactcccgac
tcccagttagcgctgcccatccagcccatcccctgcaaaccagtggattacccggtgcag
ctcttgcacagcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngccccgcc
ggctcgggccacctccagatgcaggagacctcgcagccactgaacctcacagccaaaccc
aaaggctccgacctccccagtgcgncctgccagtccctcgcaccgagtcacagggcagcc
agggacctgcagaccagcccgtccaaccttcctctggggttcctgggcgaaggcgatgcc
atcaccaaagccatccaggatgcacggcagctgctgcatggccacagcggggccatggag
gggtcgctcagcagcccctaccgcaaggaccatggcgggattgattcttccccagtgaag
gagaggatggaggagagccctgcccaccggttggacgaggctctgttgacctgtgagatg
gacggctcacggcacttccccgagtccaggaacaacaaccacatcaagcggcccatgaac
gccttcatggtctgggccaaggacgagaggaggaagattttgcaggccttcccggacatg
cacaactccagcatcagcaagatcctgggctcccggtggaaatccatgacgaaccaggag
aagcagccctactacgaggagcaagcccggctgagccggcagcacctggagaaatatccc
gactacaagtacaagccccgacccaaacgtacctgcatcgtggaggggaagcggctgcgc
gtgggcgagtacaaggcgctgatgaggaaccggcggcaggacgccaggcagggctacttg
atagggccccaaggcagccagatgcctcctgcctcctcggatgtgctgtaccagcggccg
gtgggcatgcagctgacgccccccctgatggagcactacctgccccgcagcatggacccc
ggcatgcccgtcatcgtcaacacgcgcagcctgaaggacggcgatggcggggacgacagg
cactcggtggccgacggggagatgtaccgctacagcgaggaggaggactcggagggtgag
gacaagagcgatggcgagctggtggtgctgacggactga
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