Eurypyga helias (sunbittern): 104511949
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Entry
104511949 CDS
T08356
Name
(RefSeq) ATP-dependent RNA helicase DDX3X
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
ehs
Eurypyga helias (sunbittern)
Pathway
ehs04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
104511949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehs03019
]
104511949
03041 Spliceosome [BR:
ehs03041
]
104511949
03036 Chromosome and associated proteins [BR:
ehs03036
]
104511949
Enzymes [BR:
ehs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104511949
Messenger RNA biogenesis [BR:
ehs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104511949
mRNA cycle factors
Common to processing body (P body) and stress granule
104511949
Spliceosome [BR:
ehs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104511949
Chromosome and associated proteins [BR:
ehs03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
104511949
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104511949
NCBI-ProteinID:
XP_010153055
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MSAWGGRCPGVVESLGEFSGLDLNSSDSQSEGSSSSKGRYIPPHLRNREASKQGFDSGGW
SSSRDKDAYSSFGARSDRGAKSSFFDRGNGSRGGRYEERGRGGDYDRSGFGRFDRGGNSR
WSDKSDEDDWSKPLPPSERLEQELFSGSNTGINFEKYDDIPVEATGSNCPPHIESFSDVD
MGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADG
PGDALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADI
GQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVE
QDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESD
KRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQ
FRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN
ERNINITKDLLDLLVEAKQEVPSWLENMAYEQHHKGGGSRGRSKSSRFSGGFGARDYRTS
SGSGSSSFSSSRSTSSRSGGSGSRGFGGGGYGGFYNSDGYGGNYNSQGVDWWGN
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcttggggcggccgctgccctggcgtcgtggagtctttgggcgaattttctggt
ctagacttgaattcctcagactcgcagagtgaaggaagctcttcaagcaaaggcagatac
attcctcctcacttgcggaacagggaagcttcaaaacagggttttgatagtggtggctgg
agttccagcagagacaaggatgcatacagcagctttggtgcacggtctgaccgtggagca
aaatcaagcttctttgaccgtggaaatggatcaagaggaggaagatatgaagagcgtgga
agaggtggcgactatgataggagcggctttggtagatttgaccgtggtgggaatagccgc
tggtctgacaaatcagatgaagatgactggtcaaagcctcttcccccaagtgaacgcctg
gaacaagagctcttttcaggaagcaatactggaattaactttgagaaatatgatgacatt
cctgttgaagcaacaggcagcaattgtcctccacatattgaaagtttcagtgatgttgac
atgggagaaattattatgggaaacattgagctcacacgctatacccgtcctactccagtc
cagaaacatgcaatacctattattaaagaaaagagagatttgatggcctgtgctcagaca
gggtctgggaaaacagctgcgtttcttctgccaatactgagccagatctatgcagatggc
cctggtgatgccttgagagctatgaaggaaaatggaaggtatgggcgccgtaagcaatat
ccaatctcacttgtcttggctcccactagagaactggctgtgcagatctatgaggaagcc
agaaagtttgcgtaccgttcccgagttcgtccctgtgttgtatatggtggtgcagacatt
ggccagcagatccgtgacttggaacgtggatgtcacttgcttgtagcaactccaggacga
ctggttgatatgatggagaggggaaagattggattggatttctgcaagtacctggtgctt
gatgaagctgacagaatgcttgatatgggatttgaacctcaaattcgtcgaattgttgaa
caagatactatgccaccaaagggggttcgtcataccatgatgttcagtgctactttcccc
aaggaaatccagatgctggctcgtgacttccttgatgagtacatctttctggctgttggc
agagtaggttctacatctgagaatatcacacagaaagtggtatgggtggaggagtcagac
aagcgatcatttctgcttgacctgctgaatgctacaggcaaggattctttgactctggtg
tttgtggaaactaagaagggtgcagatgctcttgaggacttcttgtaccatgaagggtat
gcctgcacaagtatacatggggatcgctcccaaagagacagggaggaagcgctacaccag
ttccgttcgggcaagagcccaattcttgttgccacagcagtagcagcaagaggactggac
atctcaaatgtaaagcatgtcattaactttgacttgccaagtgacattgaagagtatgta
catcgtattggtcgtacaggccgagtaggaaaccttggtcttgccacctcgttcttcaat
gagaggaacataaacatcaccaaggacttgcttgatcttcttgttgaggctaagcaagaa
gtaccatcttggctggagaacatggcttatgaacagcatcacaaaggaggtggcagccgt
gggcgatctaagagcagcagattcagtggaggttttggtgccagagactatcgaacaagc
agcggctctggcagcagcagctttagtagcagtcggtcaaccagcagccgcagcggagga
agcggcagcagagggtttggaggtggtggttatggaggcttctacaacagtgatggatat
ggaggaaactataactcccagggggttgactggtggggcaactga
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