Eurypyga helias (sunbittern): 104512101
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Entry
104512101 CDS
T08356
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
ehs
Eurypyga helias (sunbittern)
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ehs00536
]
104512101 (COL13A1)
Glycosaminoglycan binding proteins [BR:
ehs00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104512101 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
104512101
NCBI-ProteinID:
XP_010153254
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MGIPGRPGAPGEAGMSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGQKGEMGAAGPR
GQPGPPGQKGEKGQCAEYPHRLLPLLNSVRLAPPPVIKRRTFQGEQGQAGIQGPPGPPGP
PGPTGPAGPEGTPGQPGPVGPPGRAGEPGKPGRDGKGLPGPPGPKGDPGIQGYPGRKGEK
GRAGDPGLPGLPGTKGEKGTAENSLVGGKGEPGPPGLPGPPGPKGEAGDVGRPGAAGPRG
EKGEPGSPGNQGPVGPRGPKGEPGKDEMMDYDGNISEALQEIRTLALMGPPGLPGVAGPP
GPPGQKGEIGLPGPPGHDGEKGPRGKPGEIGPPGPQGLLGKDGPPGIKGEPGVTGQKGDK
GEPGQAGSPGLDGPSGEKGERGDQGMPGPSGLPGPIGLPGLTGEKGEPGERGDKGNPGQS
ISGPPGPQGPPGPPGLQGLPGPKGEAGLDGMKGEKGAQGEKGDRGPLGLPGASGLDGRPG
PPGTPGPSGVSGPAGPKGERGSKGDPGVAGPMGPAGLPGLQGLTGDKGIR
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgggcatccctgggcggccgggtgctccaggagaagcgggcatgtctatcatcggtccc
cgtggtccacccggacagcctggaacaagaggttttcctggattcccgggccccattggc
ttggacggcaaaccgggccatcctggacagaagggagagatgggtgctgcaggtcccagg
ggacaacccggaccccctggacaaaaaggagaaaagggtcagtgtgcagagtacccgcac
aggctgttgcctctcctcaattcagtgcggctggctccacctccggtcataaagagacgc
actttccagggtgaacaaggacaagcgggaatccaaggtcccccggggccccctggcccg
ccagggcccactggaccagccggacctgaaggaactccaggacagcccgggccagttggg
ccacctggcagagcaggagaacctgggaagcctggcagagatggaaagggcttacctgga
cctcctggaccgaagggagaccctgggattcagggataccctggcagaaagggtgagaag
gggcgagctggtgaccctgggcttcctggactccccggcacgaagggagagaagggaact
gcagagaattccctggtgggaggcaaaggagaacctggccctccaggtctgcccgggccc
cctggaccaaagggagaagctggtgacgttggccggcctggtgctgcagggccacggggg
gaaaagggggaaccgggttcaccaggcaaccagggccctgtgggcccaaggggccccaaa
ggagagcctgggaaggatgaaatgatggactacgatggtaacatcagtgaagctctccag
gaaatacgaactttggccttgatgggacccccgggacttccaggtgtggctggacctcca
gggcctccgggacagaagggtgaaatcggcttgccaggtcctccaggccacgacggtgaa
aagggaccacgcggcaagcctggagaaataggcccccctggccctcaggggctgctggga
aaggatggaccacctggaataaagggagaaccaggagtcacaggacaaaagggcgataaa
ggggagccaggacaagccggctcaccgggtcttgatggccccagtggagagaaaggcgaa
cgaggtgaccaagggatgccaggaccgtcaggattgccaggccccatcggacttccagga
ttgacaggagagaagggcgagcctggggaacgtggagacaaaggaaatccgggacaatcg
atatctggcccccctggcccccaaggcccaccaggacctccgggtcttcagggcctcccg
ggaccgaagggggaagcagggctcgatggaatgaaaggagagaagggtgcccagggtgaa
aaaggagacagagggccactgggattacccggtgcttcaggtttagacggcaggcctgga
ccaccgggtactccaggaccaagcggggtttcaggaccggcaggaccaaaaggagaaagg
ggcagtaagggagatcctggagttgcaggaccaatggggccggcagggcttcctggttta
caaggtctaactggcgacaaaggaatccgg
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