Eurypyga helias (sunbittern): 104512657
Help
Entry
104512657 CDS
T08356
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-6(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
ehs
Eurypyga helias (sunbittern)
Pathway
ehs04382
Cornified envelope formation
ehs04510
Focal adhesion
ehs04512
ECM-receptor interaction
ehs04518
Integrin signaling
ehs04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104512657
04518 Integrin signaling
104512657
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104512657
09142 Cell motility
04820 Cytoskeleton in muscle cells
104512657
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104512657
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ehs04147
]
104512657
00536 Glycosaminoglycan binding proteins [BR:
ehs00536
]
104512657
Exosome [BR:
ehs04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104512657
Glycosaminoglycan binding proteins [BR:
ehs00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104512657
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104512657
NCBI-ProteinID:
XP_010154019
LinkDB
All DBs
Position
Unknown
AA seq
1546 aa
AA seq
DB search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NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
ggtcgtcctggcccaaaaggcattaaaggagaacctgtttttgctcaaggcagtcttaaa
ggaatgaagggagaaaatggtcttcctggactggatggaatttctggcccaaaaggtttt
ccaggtccgataggttctgcaggtcctataggattaccaggtttgcagggtccaatgggt
ccccctgggccaccaggtccaaaaggtaacatgggattaggcttccaaggagagaaagga
gaaaagggtgatgtagggctgcctggccctccaggtcccccaccatccactggaatactg
gaattcatgggatttccaaaagggaagcaaggagaaaagggtgagcgaggtcctcaagga
tttcctggagaaaaaggattgcctggcctgccgggttttggaggtgttggagaaaaagga
gaaaaaggtgtgcctggcttaccgggtggcaggggtcttttgggactggatggatctgac
gggattccagggagaaagggtcatccaggccttccaggctatccaggactggatggagtc
gaaggcgtgaagggtgaattaggtgacatcggtcccccaggccctcctatcgttgttgac
agggaaggtgtagtcatttcaggtgccctgggtgaccctggaaacccagggatacctggt
cctccaggagaggaaggaatcagtggtttaccaggccttccaggagctccagggtttcca
ggactggagagagatggactgggccctggagggtctccaggtattccaggtgtgaagggt
gaagtgggagaaccaggaagagcaacgattggattaccaggcacccgcggcagagatggt
ttaccaggtctgccaggagcaccaggattgcctggtccacctcgcccttcattttcccca
gacacggtcctggatggaaggactggggctccaggggagcctggacaaagagggctgcca
ggagctttgggtcccaaggggtacaagggagaggcaggtgattgtgcttgtgatggagga
gttacaagagctggtgtaaaaggcatctcaggtccaccaggttcatcgggaagtcctggt
gtgcctgggattaagggcattggtggagacccaggcactgtgggcgcaccaggactgcga
ggccctccggctttggctggtcagcaaggtcttccaggccttaaaggagaaaaaggggat
ccgtcctatggaacgggcaaaggtgcacgtggggaccgtggtgcaacagcacccagagga
ccttcaggcatcccgggaacccctggcagggatggacttccaggcttgccaggcccacca
ggccttccaggtgatggtgggctaggtttcccaggtgaaaaaggactcccaggattacca
ggctccaagggccatcgtggagaaactggttctcctggcgttggatatccaggtcctagt
ggagttcgtggcccgccaggtgacccaggaatggatggatttccaggacaagctggtctt
ccaggccctccaggtatcaccttgccctgcatagttcctggagcatatgggcccccaggg
actcccggctttccaggattgccaggtcccaaaggcagcaaaggctttcctggcattcca
ggccaacctgggttacatgggtcaaaaggacagccagggtctgcaggaataataggcttg
caaggggaagctggcttccctgggcctcgaggagagcaagggtcacagggacttccagga
ctggatggaacagatggtttgcctgggaaactgggtgcttcaggcttagctggaacgaaa
ggagctcctggagatgtatttggtgctgagagcggagccctgggagagcgtggccgacct
ggactcccaggtgataaagggcttacaggtgatcttggatttccaggaccgaaagggtta
gacggaagaccaggcctcctaggtattaaaggcgaacggggtaatccaggatattcgggt
gtccctggactgcggggacctcctggtcctggaggtccttttggcattaagggaaaacca
ggacccttggggtcagttggccttgcaggagcaccaggctgtcaaggacttcctggagtc
aaaggcttgactggggatgtaggtccacaaggccctgctggtatgaaaggcttcccgggt
ctagatggtgctccaggatctcctggggaaagaggattcttagggccacctgggcctttc
ggtcaagatggacgtccaggtttctctgggtcaaaaggtgaaaaagggtcttctggcctg
ctgggtttccctggcatgccaggcctgcctggtgtccctggggtgcatggcttcaaagga
aatcctggcacagctggagggagagggaaccctggagttgtgggagtccaaggtcaaaaa
ggtgacagaggtgatgtaggtccacctggtcttcctgttcttggacttccagaacaggcc
ctgcaattcaaaggagacaaaggagatcctggattagctggacttggaggattccctgga
cctagaggtgataaaggaatcccaggaagccgtggaaagcctggtctccctggtccaatt
gggtcagcaagcaaagagagaggtcttcacggtgacccaggcttccctggtccacctgga
cagcctgggctgtcaggaccgaagggtacacctggtatcattggatttcccnnttcagga
gagagggggtcagatggtatcacaggaacacttggattcccaggacctattggcatccct
ggtccaaagggtaagaaatcttttgtgaccatcattcctggcattgctggagcaaaagga
gagcgaggagacccagggttcccaggagagagagggagagaaggactgaagggtgaacca
ggctacccaggaaacactggggtgaatggactcaaaggaggcccaggagatcttggccaa
gaaggaccagcaggaatccctggaagtgctgggctgagaggaatccctgggccaccagga
cctccagggcagccaggacccgttggattccctggagctcatggaacagcaggacctaaa
gggtttcaaggatttccaggtttaaatggtctgaatggcttgccgggcacaaaaggctct
cctggaacaccaggtctgagtgaagctggactgaaaggccctgcaggtctcccaggcccg
aagggtgaagaaggttctccaggcttgggtagaggagctctaggattccctggaccgaaa
ggctcatcaggagacacgggtccccctggtcctgtgggactgcctggcttgccaggaaca
cctggagcttcccttccttctgatatacgtgggagacctggtgatgctggccatccaggc
actgatgggagttcaggtactccaggccctccgggaccacgagggccccctggccccgct
tctgaccaaggtgacacaggcaatccaggtttccctggtgttcttggcttgagaggcatt
aaaggtgatgtgggacccactggtccagttggactccctggagcatctggattcaaaggt
gtaagaggggagcctggccttatggggatgccggggaaagatgggcctccgggggatcct
ggttaccctgggctgaaaggtgaaatgggccgtcgaggtctccctggccgacaaggggct
ccgggtataaccccacagccagaagaaatcacagcccctgcaggcctacccggtctgcca
ggaattgacggtgtccctggctttgatggagatcctggattccagggcccagctggaaaa
ccaggtgcaaaaggtctgccaggaagatctggtttgaaaggacgtgatggtttacctgga
tcacctggcatagctggggatccaggtccttcgggtgccccaggaccacaaggatttgaa
ggtgctgctggaaagccgggctcgcttggtttgccgggaatgcctggtcggagtgtgggc
gttggatacactttagtgaagcacagtcagtcagaccaaatcccaccttgtcccatagga
atgaacaagctgtgggacggctacagcttattgtacgtggaggggcaggaaaagtcacac
aaccaggatcttggttttgctggctcgtgtttgcctcgcttcagcaccatgccttttatt
tactgcaacatcaatgaagtgtgctactacgccagccgaaacgacaagtcctactggctc
tccaccactgctcctatccccatgatgccggtggacagtgtccagatcccgcagtacatc
agtcgctgctcagtttgtgaagcaccgtcccaggctgtggctgtgcacagccaggacatc
accatcccacagtgtccccttggctggcgcagcctgtggataggatactccttccttatg
catactgcggccggtgcggaaggtggaggacagtccctggtctcccctggttcttgcctg
gaggatttccgtgctactcccttcattgagtgcaacggcgcccggggaacgtgccactac
tttgcaaacaagtacagcttctggctgacgacggttgaacagtcgcagcagtttgtcggt
gctcctccctcagaaaccctgaaagcgggacagcttcggacgagggtcagccgctgccag
gtctgcatgaagaacttgtag
DBGET
integrated database retrieval system
