Eurypyga helias (sunbittern): 104513421
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Entry
104513421 CDS
T08356
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
ehs
Eurypyga helias (sunbittern)
Pathway
ehs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104513421 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ehs03041
]
104513421 (PRPF40A)
Spliceosome [BR:
ehs03041
]
Complex A
U1 snRNP components
U1 related factors
104513421 (PRPF40A)
Complex B
104513421 (PRPF40A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
FF_RHG35_4th
CEP164_N
WW_2
Motif
Other DBs
NCBI-GeneID:
104513421
NCBI-ProteinID:
XP_010155063
LinkDB
All DBs
Position
Unknown
AA seq
864 aa
AA seq
DB search
MGHPGMPHYPPMGMHPMGQRPPNMPPVPHGMMPQMMPPMGGPPMGQMPGMMQSVMPGMMM
SHMSQAAMQPTVPPGVNSMDAQVGVTPPGTQTTHPVVCAAQQTATTNSSVNEEQSKQKST
WTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTK
ESRWAKPKELEDLEAMIKAEESSTKPDESTPTASAPAVAAEAANATAAATTAAETAAAAT
TTTTSSAKAAPEAESAAAASVAENESAGTAAAEEQGQAASASAGQEQGGEAAASAADDSS
KQEASADAASKKDDDDAQPVKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIIN
DPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYK
KAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQTKQLRKRNWEALKNILDNMANV
TYCTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSLLRER
RRQRKNRESFQLFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQPGSTALDLFKFY
VEDLKARYHDEKKIIKDILKDKGFVVEVNTSFEDFVTVISSTKRATTLDAGNIKLAFNSL
LEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIRDRFVKEPAFEDIT
LESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSESEDDDSHSKKK
RQRSESRSVSERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDVEREKDKKERDRESE
KDRARQRSESKHKSPTKKRPGKDS
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgggacacccaggcatgccgcactatcctcccatgggaatgcacccgatgggtcagaga
ccaccaaatatgcctccggttccacacggtatgatgcctcagatgatgccccccatggga
ggaccaccaatggggcagatgcctggaatgatgcagtcagtaatgccaggaatgatgatg
tcccacatgtcccaagctgctatgcagcctacagttccgccaggggtgaacagtatggat
gcccaagtaggcgtaacacctcctggaactcagacaacgcatcccgtagtttgtgcagcc
cagcaaactgccacaaccaacagttctgttaatgaagagcagtcgaaacagaaatcgaca
tggacggagcacaaatcacctgatggaagaacatactactataacactgaaacaaagcag
tcgacgtgggagaagccagatgatctcaaaacgcctgctgagcaattgttgtctaagtgt
ccttggaaagagtataaatctgattctggcaagccctactactataattcccaaacaaag
gaatcgcgctgggcaaaacccaaagagctggaggatcttgaagcaatgattaaagctgag
gaaagcagcacaaagcccgacgaatcaactccaacagcatctgctccagctgttgcagca
gaagcggcaaacgcaaccgccgcagccacaaccgctgctgaaactgccgccgctgctacc
accaccaccacgtcctcagcaaaggcagcccccgaagcggagtccgctgcagctgcttcg
gtggcagaaaacgagagtgctggcaccgccgcggctgaggagcagggacaagcagcttct
gcgtctgctgggcaggagcagggtggagaagcagcagctagcgcagcagacgactcttcc
aagcaggaggcttcagcagatgctgcttcaaagaaagatgacgacgatgcccaacctgtt
aaaaaaacctacacgtggaatacaaaggaagaggcaaagcaagcgtttaaagaactgtta
aaagagaagcgagtgccatccaatgcttcttgggagcaggctatgaaaatgatcatcaat
gatccgagatacagtgctttggcaaaattaagtgaaaaaaagcaagcctttaatgcttac
aaagttcagacagaaaaagaagagaaagaagaagcaagatcaaaatacaaagaagctaaa
gaatccttccagcgttttcttgaaaaccatgaaaagatgacatccacaacaagatacaaa
aaagctgaacaaatgtttggggagatggaagtctggaatgcgatatctgagcgtgatcgt
cttgaaatttatgaagatgtcctgttttttctctccaagaaagagaaggaacaaaccaaa
cagttacggaagaggaattgggaagctttaaagaacatcctagataacatggctaacgtc
acgtactgtacaacttggtcagaggctcagcagtatttgatggacaatcctacattcgca
gaagacgaggaacttcagaacatggataaggaggacgcgctgatctgcttcgaggaacac
atcagggcattggaaaaggaggaggaagaggaaaaacaaaagagtttgcttcgagaaaga
aggcggcagcgtaaaaacagagaatcttttcagctgttcctagatgaactgcacgagcac
ggacagttgcactcgatgtcctcctggatggagttgtacccgaccataagctccgacatc
agattcaccaacatgcttggtcagcctggatcaacagcacttgatcttttcaagttctat
gtggaggacttgaaagcacgctaccacgatgaaaagaagatcataaaagatatcttaaag
gataaagggtttgtggtggaagtgaatacttcttttgaagacttcgtcacggtcatcagc
tcaacgaaaagggcgaccactctagacgcgggcaatatcaagctggctttcaacagcctg
ctagaaaaggcagaagcccgtgaaagagagagggaaaaagaagaagctcgcaaaatgaag
cggaaagagtctgccttcaagagtatgctgaagcaagcgactccccccattgagctggac
gccgtctgggaagacatcagagacagatttgtgaaggaaccagcgtttgaagacatcact
ctggagtctgaaaggaaaagaatatttaaagacttcatgcatgtactagagcacgagtgt
cagcaccatcactccaagaacaagaagcactctaaaaagtccaagaaacaccacaggaag
cggtcgcgttcccgttcgggctcagagtctgaggatgacgacagccattcgaagaagaag
aggcagcgttcggagtccagatcggtttctgagcgttcttccagcgcggagtccgagaga
agttacaagaagtcaaaaaaacacaagaaaaagagcaagaagaggagacataagtcggat
tcaccagaatcggacgttgagcgagagaaggacaagaaggagagggatcgcgagagtgag
aaggacagagcgcgacaaaggtccgagtcgaaacataaatctcctacgaagaaacgaccc
gggaaagattcc
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integrated database retrieval system
