Eurypyga helias (sunbittern): 104513825
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Entry
104513825 CDS
T08356
Symbol
PTBP1
Name
(RefSeq) polypyrimidine tract-binding protein 1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
ehs
Eurypyga helias (sunbittern)
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehs03019
]
104513825 (PTBP1)
03041 Spliceosome [BR:
ehs03041
]
104513825 (PTBP1)
Messenger RNA biogenesis [BR:
ehs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
104513825 (PTBP1)
Spliceosome [BR:
ehs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104513825 (PTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
104513825
NCBI-ProteinID:
XP_010155598
LinkDB
All DBs
Position
Unknown
AA seq
527 aa
AA seq
DB search
MSSNSSSAANGNDSKKFKGDSRSAGVPSRVIHVRKLPSDVTEAEVISLGLPFGKVTNLLM
LKGKNQAFIEMNTEEAANTMVNYYTTVTPVLRSQPIYIQFSNHKELKTDNSPNQARAQAA
LQAVNSVQSGNLALSASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTV
LKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNND
KSRDYTRPDLPSGDNQPSLDQTMAAAFGAPGIISASPYAGAGFPPTFAIPQAAGLSVPNV
HGALAPLAIPSAAAAAAAAGRIAIPGLTGAGNSVLLVSNLNPERVTPQCLFILFGVYGDV
QRVKILFNKKENALVQMADGNQAQLAMSHLNGQKLHGKPIRITLSKHQTVQLPREGQEDQ
GLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSITEEDLKMLFSSNGGMVKGF
KFFQKDRKMALIQMGSVEEAIQSLIDLHNHDLGENHHLRVSFSKSTI
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaactcttcttctgcagctaatggaaacgacagcaagaaattcaaaggcgat
agtagaagtgctggggtcccatcccgagtaatccacgtccgtaagctccccagtgacgtc
acggaggcagaggtcatttctttgggcttaccttttggcaaggtcaccaatcttctaatg
ctgaaaggaaaaaatcaggctttcatagaaatgaatacggaggaggcagccaacaccatg
gtcaactactacaccactgtcactccagtcctgcggagccagcccatctacatccagttc
tccaaccacaaggagctgaagacggacaactctccaaaccaagcacgtgcccaggcagct
ctgcaagcggtgaactccgttcagtctggaaacctcgcgctgtcggcctcggctgcggcg
gtagatgcaggaatggcgatggctggccagagccctgtcctgaggatcattgtcgagaat
ctcttctatcctgtcactcttgatgttctgcatcagattttttccaaatttggtacagtc
ttgaaaatcatcacattcacgaagaacaaccagtttcaggccctgttacaatatgccgac
ccagtgagcgctcagcacgccaaactgtccctagatggacagaatatctacaatgcctgt
tgtacgctgcgcatcgatttctcaaagctcacgagtctcaatgtaaaatacaacaacgat
aagagcagagattatacacggccggacctaccttctggggacaaccagccctctctggat
cagaccatggcagctgcttttggtgccccaggaataatctctgcttctccatatgcggga
gctggctttcctcctacctttgcaattcctcaggctgcaggcctgtcagttccaaatgtc
catggagcgctagctcctttggctatcccatcagcagcagctgcagcggctgccgcagga
cggattgccattcccggcctcactggggcagggaactccgttctgctggttagcaatctg
aaccctgagagagttacaccccaatgcctctttattcttttcggagtctatggcgacgtg
cagagggtgaagattttgttcaataagaaggagaatgccctagttcagatggctgatggg
aaccaggcccagctcgccatgagccatttaaatggtcagaagctccacgggaagccgatc
cgtatcacgctctccaagcaccagacggtgcagcttccccgcgaggggcaggaagaccag
gggctgactaaggactacgggaactctcctctacatcgcttcaagaaaccaggctccaaa
aatttccagaacatctttcccccttctgccactcttcatctgtccaatattccaccttcg
ataactgaagaagaccttaagatgttgttctcgagcaacggtgggatggtcaaagggttc
aaattcttccagaaggaccgtaaaatggctctgatccagatgggctctgtggaagaagcc
attcagtcgctcatcgacctccacaatcacgacctgggtgagaaccatcacctgcgcgtg
tccttctcgaagtcgaccatttaa
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